Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0927 ATGGGCAAGCAAGGACCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGCAATGGGCCACCAGAGAAGCCAGTCCTATGCAATGCCTGTGGGTCTCGATGGAGGACAAAGGGAACACTTGCAAATTATACCCCCCTACATGCACGGGCAGATGATTATGAGGATCAAAAGGTTTCCAGGGTAAAGAGCTTATCGATAAATAAGAACAAAGAAACAAAATTGCTCAAACGAAAGCAGAACCATGATAATGTCGTATCTGGAAGTCTTGGCCCTGATTACAACCAGGCATTCTGCAAGGCTGTGGATGAAGATACAAGCAATCGATCGAGTTCAGGATCAGCTATTTCTAACTCAGAGAGCTATGCTCAATTTGGTGGCACTGATGCTAGTGATTTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATACCATGGTGCCTTCGAAAAAGAGGACCTGTGTGGGTCGTTCAAAGCCTTCTTCTGTTGAGAAGCTGACAAAAGATTTATGCACTATTCTTCATGAACAACGGTCTTATTTTTCTGCATCTTCTGAAGAGGATCTTCTTTTTGAAAGTGAAACACCTATGGTCTCTGTGGAGATAGGGCATGGAAGCATTCTTATCAGGCATCCTAGCTATATAGCTCATGAAGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAAGCAATGCCCCGTGAGTGAGACATATTCATATTCTGGTGCCAATCTTAAGCATGACAAGTCTCAGCTTGAGAAAGTACAGATCCTTGGAAATCATGATTCACCGCTATGCTCGATAGATTTAAATGATGTAGTAAACTATGAGGAGTTCGTGAGAAACCTGACAAATGAAGATCAGCAGCAATTATTGAAGTTTCTTCCTTTGGTTGACACTGCTAAACTTCCTGATAGCCTTAAAGTCATGTTCAATAGCTCTCAATTCAAGGAGAACTTAATTTATTTTCAGCAGCTTCTTGGGGAAGGTGTCTTTGATATCTCTTTGTTGGGGGCAAAACCTGAAGATTGCAAGACCTTGAAAAGGCTTGCATTATCCAATCTGTCGAAGTCAAAATTGCTTGAACATTATAATTTTCTAAAGAGATGTAAAAACAAAGCTGGAAAATCTGTTACTCTGGGATCAACTGGTAAAGCATCATCTAACTTTGCAAATGTCAAGAGATTGCGTGATAGCCGAAATCAAAACTTTCCAGAATTGAAGACAATAATGAGGAGCCCCAAAAGAATGACCATAAATTCTGGCTGTGATGGCAAAGAAGTTGCAGAAGATGGCTCTTACAGTCCTAAAAGCCTATTTGCCTTGCCACCTGATGCTAGCTCTCTCCTGCTTGATTCATTAAACTTTGAAGCGGAGAGTTCTGATCAGGATCTGCTGCTAGAGGTGCCATCTAACAGTTCATTTCCACAGGCCGAGCTCCTGCGCCCAACTTCAAGCTTTGGTACTCAAGCCAGCACTTGTAGCAGCTCAGTGTACTCACATCTTATCCATAATTGA 1521 0.4241 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARADDYEDQKVSRVKSLSINKNKETKLLKRKQNHDNVVSGSLGPDYNQAFCKAVDEDTSNRSSSGSAISNSESYAQFGGTDASDLTGPAQSVVWDTMVPSKKRTCVGRSKPSSVEKLTKDLCTILHEQRSYFSASSEEDLLFESETPMVSVEIGHGSILIRHPSYIAHEEESEASSLSVDNKQCPVSETYSYSGANLKHDKSQLEKVQILGNHDSPLCSIDLNDVVNYEEFVRNLTNEDQQQLLKFLPLVDTAKLPDSLKVMFNSSQFKENLIYFQQLLGEGVFDISLLGAKPEDCKTLKRLALSNLSKSKLLEHYNFLKRCKNKAGKSVTLGSTGKASSNFANVKRLRDSRNQNFPELKTIMRSPKRMTINSGCDGKEVAEDGSYSPKSLFALPPDASSLLLDSLNFEAESSDQDLLLEVPSNSSFPQAELLRPTSSFGTQASTCSSSVYSHLIHN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0927 506 Pfam Asx homology domain 250 334 IPR028020 -
Dod02g0927 506 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Dod02g0927 506 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Dod02g0927 506 Gene3D - 3 85 IPR013088 GO:0006355|GO:0008270
Dod02g0927 506 CDD ZnF_GATA 6 54 IPR000679 GO:0006355|GO:0043565
Dod02g0927 506 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 262 374 IPR044867 -
Dod02g0927 506 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Dod02g0927 506 Gene3D - 253 359 IPR038108 -
Dod02g0927 506 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Dod02g0927 506 PANTHER OSJNBB0038F03.10 PROTEIN 1 243 IPR044589 -
Dod02g0927 506 PANTHER OSJNBB0038F03.10 PROTEIN 245 505 IPR044589 -
Dod02g0927 506 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 243 - -
Dod02g0927 506 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 245 505 - -
Dod02g0927 506 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0927 Dod-Chr2 11838745 11844385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0927 1 482 C2C2-Gata Transcription Factor Family AT4G17570 51.946 9.65e-151 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod02g0927 ASXH 6.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0927 - - gmx:100798504 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0927 02 11838745 11844385 Dod05g1320 05 36898684 36904521 PCT