Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0924 ATGATATATCGTGATTGCAATCTCATTTCTCCAAAAGGATGTGATTGTACTAATGGATGCTCTGACTCGGCCAAATGTTCTTGTGTTGTCAGGAATGGGGGAGAGATCCCATTCAATCATAATGGGGCTATTGTAGAAGCAAAGCCTCTTGTTTATGAATGTGGACCTTCTTGCAAGTGCCCTTCAACATGCTATAACAGAGTCAGCCAACATGGGATAAAGTTTCAACTTGAAATTTTCAAGACCCCTACAAGGGGATGGGGTGTGAGATCCCTAAATTCCATCCCTTCTGGAAGTTTTATCTGTGAATATATAGGAGAGCTTCTTGAAGAAAAGGAAGCTGAACAAAGAACCGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTACAGCAACAGCACTCTTTGGGATGGACTTTCAACCCTTATTCCTGATGCACAGCCAAGTTCTTGTGAAGTTGTAAAGGATGGCGGTGGCTTCACCATTGATGCCGCACAGTATGCTAATGTGGGGAGATTCATCAACCATAGCTGCTCTCCTAATCTTTATGCTCAGAATGTGCTTTATGATCATCATGACAAAAGGATGCCTCACATAATGTTTTTTGCTGCTGAGAACATTCCTCCTTTGCAAGAGCTCACTTACGACTACAACTACATGATTGATCAGGTCCGTGATTCTGATGGTAATATAAAAAGGAAGGATTGCTATTGTGGTTCCGTGGAATGTAGTGGTAGGATGTATTGA 750 0.412 MIYRDCNLISPKGCDCTNGCSDSAKCSCVVRNGGEIPFNHNGAIVEAKPLVYECGPSCKCPSTCYNRVSQHGIKFQLEIFKTPTRGWGVRSLNSIPSGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNNYSNSTLWDGLSTLIPDAQPSSCEVVKDGGGFTIDAAQYANVGRFINHSCSPNLYAQNVLYDHHDKRMPHIMFFAAENIPPLQELTYDYNYMIDQVRDSDGNIKRKDCYCGSVECSGRMY* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0924 249 SMART PostSET_3 233 249 IPR003616 -
Dod02g0924 249 SUPERFAMILY SET domain 12 246 IPR046341 -
Dod02g0924 249 ProSiteProfiles Pre-SET domain profile. 12 72 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod02g0924 249 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 1 248 - -
Dod02g0924 249 SMART set_7 75 225 IPR001214 GO:0005515
Dod02g0924 249 Pfam SET domain 86 219 IPR001214 GO:0005515
Dod02g0924 249 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 1 248 - -
Dod02g0924 249 Gene3D SET domain 1 249 IPR046341 -
Dod02g0924 249 ProSiteProfiles Post-SET domain profile. 233 249 IPR003616 -
Dod02g0924 249 Pfam Pre-SET motif 10 67 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod02g0924 249 ProSiteProfiles SET domain profile. 75 219 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0924 Dod-Chr2 11832582 11833331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0924 7 249 EF-hand Containing Proteins AT5G13960 41.897 4.76e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod02g0924 SET 3.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0924 K11420 - gmx:100803378 457.988