Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0919 ATGAAGCCGCAGAACCTCACAGCTTTGAATTTGCTCTCACAACATGTTTCCTATCGTCCTCACCTCTCTATGGAAGAGATTCCAAATTTGGGGAATTTTAGTGTGAATAAGCCTGTGACTAAGGAGCCTAAAGGTGCACAGTTGACAATCTTTTATGGTGGGGAAGTCATTGTCTTTGATGATATTGCAGCGGAAAAAGCCAACGAGATCATGTCCTTTGCCAGCAAAGGAACCCCCAAAAGCCAGAACAACTGGTCTCACACATACACTCAGAGCCACCGTTCATTTCCTTCTCCTAATGTGGTCAGAAGTTCTGCTGCTCCCACTCCTGCATTCCCTTTTCTCATCCCTAACAGTGGCAACAATTTGGTTGAAGAGCACCCTCAAGCACGATCCAGATCTGCTGTCTGTGGTAATTTCCTTATATCACTGATATTTGAGGCTATTGAAGATTTGTGTCATGGTTCATGCTTTTGTCTAATTCGTAACTTTCCCTTTTTTATTCAGGTCTTCCACTTGCTAGGAAAGCCTCACTACATCGGTTCCTGGAGAAGAGAAAGGATAGGTAGGCAGGATGAACTCTCTCAAACAAATAAGGAAAAATTCTAA 609 0.4319 MKPQNLTALNLLSQHVSYRPHLSMEEIPNLGNFSVNKPVTKEPKGAQLTIFYGGEVIVFDDIAAEKANEIMSFASKGTPKSQNNWSHTYTQSHRSFPSPNVVRSSAAPTPAFPFLIPNSGNNLVEEHPQARSRSAVCGNFLISLIFEAIEDLCHGSCFCLIRNFPFFIQVFHLLGKPHYIGSWRRERIGRQDELSQTNKEKF* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0919 202 PANTHER PROTEIN TIFY 10A 3 94 - -
Dod02g0919 202 Pfam tify domain 42 75 IPR010399 -
Dod02g0919 202 ProSiteProfiles Tify domain profile. 41 76 IPR010399 -
Dod02g0919 202 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 3 94 IPR040390 -
Dod02g0919 202 SMART tify_2 41 76 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0919 Dod-Chr2 11791905 11793769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0919 35 134 Tify Gene Family AT1G74950 40.566 1.54e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod02g0919 tify 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0919 K13464 - gmx:100306332 133.65