Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0917 ATGGAGGAACGGTATGAGACACTGAAGGACCTTGGTTCTGGGAATTTCGGAGTGGCTAAGTTGGCCAAGGACAAGAACACAGGGGAGCTTGTTGCAGTTAAATTCATTGAAAGGGGGAAAAAGATTGATGAAAATGTTCAAAGGGAGATCATTAACCACCGATCTTTAAGACACCCAAATATTATCAGGTTCAAAGAGGTGATGCTGACCCCTACTCATTTAGCTATTGTCCTGGAGTATGCTGCTGGTGGTGAACTCTTTGTGAGGATATGCAATGCGGGTCGATTCAGTGAAGATGAGGCGAGATTTTTCTTCCAGCAACTAATATCAGGAGTTAGCTACTGTCATTCCATGCAAATATGTCATAGAGATTTGAAATTGGAAAACACTCTCTTGGATGGAAATCCAGCTCCTCGACTTAAAATATGTGATTTTGGTTTCTCCAAGTCTGCTTTACTGCACTCTCAACCCAAATCAACCGTTGGAACACCAGCATATATTGCTCCGGAGGTTTTGTCACGAAAGGAATATGATGGAAAGATTGCAGATGTTTGGTCATGTGGGGTGACTCTTTATGTCATGTTAGTTGGAGCATACCCTTTTGAAGATCCAGAAGACCCAAGAGATGTCAGAAAGACTATTGGGAGAATTATGAGTGTTCAGTACTCCATACCCGATTATGTTCGTGTTTCTTCAGAGTGTAGGCATCTTCTCTCTCGCATTTTTGTTGCCAATCCTGCCAAGGCAAGTGTTATTAAATATTAA 765 0.4183 MEERYETLKDLGSGNFGVAKLAKDKNTGELVAVKFIERGKKIDENVQREIINHRSLRHPNIIRFKEVMLTPTHLAIVLEYAAGGELFVRICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRDVRKTIGRIMSVQYSIPDYVRVSSECRHLLSRIFVANPAKASVIKY* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0917 254 PIRSF ILK 1 246 - -
Dod02g0917 254 Gene3D Transferase(Phosphotransferase) domain 1 81 250 - -
Dod02g0917 254 Pfam Protein kinase domain 5 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0917 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Dod02g0917 254 SMART serkin_6 5 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0917 254 SUPERFAMILY Protein kinase-like (PK-like) 3 248 IPR011009 -
Dod02g0917 254 ProSiteProfiles Protein kinase domain profile. 5 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0917 254 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Dod02g0917 254 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 250 - -
Dod02g0917 254 PANTHER SERINE/THREONINE KINASE 3 250 - -
Dod02g0917 254 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0917 Dod-Chr2 11783347 11787071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0917 4 246 CBL-interacting serine-threonine protein kinases AT2G26980 43.359 5.37e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dod02g0917 Pkinase 8.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0917 K14498 - gmx:547797 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0917 02 11783347 11787071 Dod02g0917 02 11783347 11787071 ECH
Dod02g0917 02 11783347 11787071 Dod05g1305 05 36668558 36672341 PCT