Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0915 ATGGCGGCCGCACACTTGCCTCTCAAAAGCCAGATCAATAGAGGAGGCGGAGCACTACGAGCGATGATAAAGTTCATGGAGAAGGTTTCTTTCGCCGCCAACAACGAGGAGTTGACGGTGGAGGAGAAGAACCTCTTCTCCATGGCGTACACGAACATGATCGGTGCTAGGCAGGATCCTGAAACTCCTCGACTGTCGCCTCATCCCGTCGGCCTCCTCCGGCGACTGCAAGGTCTTCGACCCGAAGATGAAGGGGGACCACCACAGGTTTGGAATAAAGATGTTAGATTCTTCCGTGTTAAAGATTCTTCAGATAGTCCAATTGCATACTTCTATTTTGATCCTCATAATCCTGATAGGCCCAAGAATGACAAAGCAACCATTCTTAGTGATACAATTCAATTGCTGAAGGATCTTACTTCTCAAGTTAGTAAACTCAAAGGCGAATATGATGCACTAAATGAAGAATCTCGAGAGGCTAAATTTTTAGCAGTGTTGATTGTTATATCTTGGGCCATGGACTTTCTGGTTCGTGACTATGTACTCATGCCTTTCTTAGACAGGCATTTTCCCATCCTTTGTTCTAATAGTCGTTCCAAAACAAGCCATTTCTATTGGAGTCAAGAATGA 630 0.4508 MAAAHLPLKSQINRGGGALRAMIKFMEKVSFAANNEELTVEEKNLFSMAYTNMIGARQDPETPRLSPHPVGLLRRLQGLRPEDEGGPPQVWNKDVRFFRVKDSSDSPIAYFYFDPHNPDRPKNDKATILSDTIQLLKDLTSQVSKLKGEYDALNEESREAKFLAVLIVISWAMDFLVRDYVLMPFLDRHFPILCSNSRSKTSHFYWSQE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0915 209 Gene3D - 70 165 - -
Dod02g0915 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 116 159 IPR036638 GO:0046983
Dod02g0915 209 Coils Coil 136 156 - -
Dod02g0915 209 SUPERFAMILY 14-3-3 protein 20 59 IPR036815 -
Dod02g0915 209 Gene3D - 10 60 IPR036815 -
Dod02g0915 209 PANTHER TRANSCRIPTION FACTOR BHLH121 118 159 - -
Dod02g0915 209 PANTHER TRANSCRIPTION FACTOR BHLH121 118 159 IPR044579 GO:0003700|GO:0055072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0915 Dod-Chr2 11759730 11763600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0915 117 159 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 74.419 9.87e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0915 - - mnt:21407670 76.6405