Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0910 ATGCCACCGGCGGAGAAATCAGCTGAGGGGAACGAGTTGGATGAAATTTGGGATAAGATGGACCGTGGCCTGGATGCTCTGGTTAGTCCCTTTGAAGAGGGAAGAGTTTCCAATGAAGTAAAATGTGGTTTCGGTGCGGTCACCAATAATCTTCTCCACCATTCTATCTATGATAATAATAAGGGTGATGTGTCTCGGAATGCAAATGCTGAAGGACGAAATTCTTGTTTGGATATGCCCTTGAAGTTCAATTTTATATCTCCAGAGCCACTGGTAGAGAAATCAGAGTATGAGAAAGTGTTGGGCGCGATTTGGGCCGTGATGGAGTGTGGCTTCCATGTTATGCAACAAGAGAAGAATTCTTCTGCTTCTAGGTTACTTGGAAATCCGGGCGGAAAATATGACAGGAGAGATTCTTATACTGTGGACCATGTGGATGGCTCTGTCTTTGATGAGCTTCAGGACGGAACTTCTGGAAATGATGATTATGACCACTGTAATCACAAGGGGACAGTGTGGGATATAATTCCTGGAGTGCAAAAGTCTGTGTATCCTCGTCAGTGTGAAGCCTTTGAATTTCTCTGGAATAATTTAGCTGAATTTGAGGAGTCTTTAACTCCTGTTCATCCTGTTCTCCTTGATCTTTCTGAAGAAGGCAAGAAATTCCAAAGATATAGATTGAACCCTGAGGAAAGTGCCAAAATGAAGCTCTTAATGGAACTTATTAGGCTTAGTGGGATTTTCAATGAAGAAGTCTTGGTCTTTAGCCAATTTATTGAGCCCTTGAAGCTTCTGACTAGCCAGCTTAAGCATCATTTTGGTTGGAGTGAGGGAAGAGAGGTGCTACAAATGCATGGAAAGCTTGAATCAAGGTATAGCCAAGCATCAATCAAAGCCTTCAACGATCCCAAGAGCAAAGTAAGGGTAATGTTAGCTTCAACCAAGGAGTTGGTGTTCTTTAATTCTGATGGGGCTCTCTGCATTGTGAAGTTTTTTCCTTTGCTGAATTGGAAGATGAATTGCTGTATCAGATGTTTCGGCATCAAAGGCTTAGACATATATTTGAGAAAACAATTTGGCCCAGTCTTTCCGTGCATTGCATCAATAAGAGGATTGATTAGGGTTTCAGAAACCGTGCATTGCATAGGCCAACCCCTTCACTTTCACCGCGACTCACTCACTCGACTTACACGGCGCCTTCAATCAAGAAAAATGACTAAGAGAACGAAGAAGGCAGGCATTGTTGGAAAATATGGTACCCGATATGGTGCTAGTCTGCGGAAGCAGATTAAGAAGATGGAAGTTAGCCAACATAGCAAATTTTTCTGTGAATTTTGTGGAAAGTATGCTGTGAAGAGGAAGGCTGTAGGAATTTGGGGATGCAAGGATTGCGGTAAAGTGAAAGCAGGCGGTGCCTACACTTTGAATACTGCGAGTGCTGTGACTGTTAGGAGCACTATCCGGAGGCTGAGAGAACAAACTGAGGGCTGA 1491 0.4326 MPPAEKSAEGNELDEIWDKMDRGLDALVSPFEEGRVSNEVKCGFGAVTNNLLHHSIYDNNKGDVSRNANAEGRNSCLDMPLKFNFISPEPLVEKSEYEKVLGAIWAVMECGFHVMQQEKNSSASRLLGNPGGKYDRRDSYTVDHVDGSVFDELQDGTSGNDDYDHCNHKGTVWDIIPGVQKSVYPRQCEAFEFLWNNLAEFEESLTPVHPVLLDLSEEGKKFQRYRLNPEESAKMKLLMELIRLSGIFNEEVLVFSQFIEPLKLLTSQLKHHFGWSEGREVLQMHGKLESRYSQASIKAFNDPKSKVRVMLASTKELVFFNSDGALCIVKFFPLLNWKMNCCIRCFGIKGLDIYLRKQFGPVFPCIASIRGLIRVSETVHCIGQPLHFHRDSLTRLTRRLQSRKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0910 496 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 408 476 IPR002674 GO:0003735|GO:0005840|GO:0006412
Dod02g0910 496 TIGRFAM eL43_euk_arch: ribosomal protein eL43 405 495 IPR002674 GO:0003735|GO:0005840|GO:0006412
Dod02g0910 496 Gene3D - 192 317 IPR027417 -
Dod02g0910 496 SUPERFAMILY Zn-binding ribosomal proteins 414 486 IPR011332 GO:0006412
Dod02g0910 496 CDD SF2_C_SNF 232 315 - -
Dod02g0910 496 Gene3D - 405 496 IPR011331 GO:0003735|GO:0005840|GO:0006412
Dod02g0910 496 PANTHER ZGC:171772 397 496 - -
Dod02g0910 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 314 IPR027417 -
Dod02g0910 496 Pfam Ribosomal L37ae protein family 408 492 IPR002674 GO:0003735|GO:0005840|GO:0006412
Dod02g0910 496 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 397 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0910 Dod-Chr2 11726529 11729933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0910 405 496 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 92.391 2.09e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0910 K02921 - gmx:100798254 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0910 02 11726529 11729933 Dod02g0910 02 11726529 11729933 ECH