Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0906 ATGGAGGACAAGGTGAACCAATTGTGGTTGCTAGTCAAAAAGCTTAACACGCGTGGCTTCCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTTGGCATTGTTAATCACCCGAATTTGGTTAAGCTTTTGGGTTACTGCTCTGTAGACACTGAGAGAGGAATTCAACGGCTGTTGGTGTACGAGTTCATGCCCAACAGGAGCTTGGAGGATCATCTTTTCAAACTTTCTTTACCCCATTTACCTTGGAAAACTAGGTTGCAGATCATGCTTGGTGCTGCTCAAGGATTAGATTATCTACACGAGGGGTTAGAGGTTCAGGTGATCTACCGAGATTTCAAATCTTCAAATGTGCTGTTGGACACAAATTTCCATCCCAAGCTCTCAGATTTCGGTCTTGCTAGGGAGGGCCCAACAGGCGACAAGACTCATGTATCTACTGCAGTAGTTGGGACACATGGATACGCAGCCCCAGAGTATGTTGAAACAGGCCATCTCAAAGCTAAGAGTGACATTTGGAGTTTTGGTGTGGTACTCTATGAGATCCTCACAGGCAGGCGGGTACTAGAGAGAAACCGTCCGACTGGAGAACAGAAGCTTCTAGAATGGATTAAGAAGTACCCTGCTGACAGTAGACGGTTCCGCACGATAATGGACCCACGCCTCAGGAACCAATACTCCTTTGTTGCAGCTCAGAAAACAGCCAAGTTGGCAGATAGCTGCTTGAAGAAGAACCCTGAGGACAGACCATCCATGAGTCAGATAGTGGAGAGCTTGAAGCAAGCATTGCAGCTTTCGGAAACCTCAAACAATTCTCAGAATAACACCTGA 834 0.464 MEDKVNQLWLLVKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDTERGIQRLLVYEFMPNRSLEDHLFKLSLPHLPWKTRLQIMLGAAQGLDYLHEGLEVQVIYRDFKSSNVLLDTNFHPKLSDFGLAREGPTGDKTHVSTAVVGTHGYAAPEYVETGHLKAKSDIWSFGVVLYEILTGRRVLERNRPTGEQKLLEWIKKYPADSRRFRTIMDPRLRNQYSFVAAQKTAKLADSCLKKNPEDRPSMSQIVESLKQALQLSETSNNSQNNT* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0906 277 SUPERFAMILY Protein kinase-like (PK-like) 10 260 IPR011009 -
Dod02g0906 277 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0906 277 PIRSF ILK 5 274 - -
Dod02g0906 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Dod02g0906 277 Gene3D Phosphorylase Kinase; domain 1 4 65 - -
Dod02g0906 277 PANTHER RECEPTOR-LIKE KINASE PLANT 3 269 - -
Dod02g0906 277 Pfam Protein kinase domain 12 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0906 277 Gene3D Transferase(Phosphotransferase) domain 1 66 277 - -
Dod02g0906 277 PANTHER OS01G0588500 PROTEIN-RELATED 3 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0906 Dod-Chr2 11672139 11676266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0906 8 260 Glycoside Hydrolase AT3G07070 48.235 1.08e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g0906 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0906 - - gmx:100782248 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0906 02 11672139 11676266 Dod02g0906 02 11672139 11676266 ECH
Dod02g0906 02 11672139 11676266 Dod05g1294 05 36486855 36490634 PCT