Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0893 ATGGCGCTCTATCTTTTGTGTGGTGTGCTTTTTACGACCTTTATTTTCATGAAAAGTGTGGCAGATACTTCATGCACCGATTGTTTTGTTCATTCACGGGCAACATATTACCCGAATTCTGAGGAACATGGGACAGACGTAGGTTCATGTGGGTTTGGTTCGTTTGGTGCTACAGTCAATGGCGGGGACGTGTCAGCCGCATCTAATCTTTATCGAGACGGTGTAGGCTGTGGCGCCTGTTACCAGGTGAGGTGTACCAACAGTGCCTATTGCTCAGATAATGGTGTCAGTGTAGTTATAACTGACCAAGGCTCAGGTGATAACACCGATTTCATTCTCAGCAAACATGCCTTTGGTCGGATGGCTCAGACCACTGATGCAGCTACTTCTCTATTATCCCTTGGCATGGTTGATATTCAATATAGACGTGTTGCATGCAGCTATCCAAACAAGAACATAACATTCAAGATAGATGAGAGCAGCAGCAACCCTTCTTACCTGGCTTTTGTCATATGGTATCAACAAGGAAGGAGAGACATAACTGCTGTGCAGCTCTGTGAGGTACTAGTACTGCTTCCTTATCAGAAGATATATAACTTTGCAAATCTCACAGATCTTTGTGCTGAATTAAGTTGGTCTTTTAATCAGCTAATTCTAGTCAGAGAATACTTAGTCAAAGATTTGAGTATTCAAGATCTTATATTCTTCTGTAAATGA 717 0.4226 MALYLLCGVLFTTFIFMKSVADTSCTDCFVHSRATYYPNSEEHGTDVGSCGFGSFGATVNGGDVSAASNLYRDGVGCGACYQVRCTNSAYCSDNGVSVVITDQGSGDNTDFILSKHAFGRMAQTTDAATSLLSLGMVDIQYRRVACSYPNKNITFKIDESSSNPSYLAFVIWYQQGRRDITAVQLCEVLVLLPYQKIYNFANLTDLCAELSWSFNQLILVREYLVKDLSIQDLIFFCK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0893 238 PANTHER EXPANSIN-B3 8 188 - -
Dod02g0893 238 Gene3D - 16 146 IPR036908 -
Dod02g0893 238 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 151 IPR007112 -
Dod02g0893 238 PANTHER EXPANSIN-LIKE B1 8 188 - -
Dod02g0893 238 Gene3D - 147 200 IPR036749 -
Dod02g0893 238 SUPERFAMILY Barwin-like endoglucanases 15 150 IPR036908 -
Dod02g0893 238 Pfam Lytic transglycolase 67 141 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0893 Dod-Chr2 11399941 11402150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0893 9 187 Expansin Gene Family AT4G17030 45.304 1.62e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0893 - - gmx:100794009 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0893 02 11399941 11402150 Dod02g0893 02 11399941 11402150 ECH
Dod02g0893 02 11399941 11402150 Dod05g1279 05 36178773 36181033 PCT