Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0871 ATGGGAGGGGCATCACTGCCTCCAGGATTTCGTTTCCATCCAACTGATGAAGAACTGGTAGGATATTACCTGAAAAGAAAGGTGGAGGGGCTTGAAATTGAACTTGAAGTTATCCCCGTGATTGATTTGTACAAGTTTGATCCGTGGGAGTTGCCCGAGAAATCTTTCCTACCAAAAAGAGATTTGGAATGGTTTTTCTTTTGTCCAAGGGATCGCAAGTACCCAAATGGATCAAGAACCAATAGAGCTACCAAAGCTGGCTATTGGAAGGCCACTGGAAAAGACAGAAAGGTTGTGTGCCAATCTAGTCCAGCAACATCCACCATGACAGCCACTGGCTACCGCAAGACCCTGGTTTTCTATCGTGGAAGAGCTCCTTTAGGTGATCGAACCGATTGGGTTATGCACGAGTATCGCCTCTGTGATGATCTTGGCCAAGACTCACCATGTTTTCAGGGTGCTTTTGCTTTGTGCCGAGTTATTAAAAAGAATGAGAAGGCCAATGATTCCAAGGGAGTAGGACAGAAGGGTAAAAGGGGTGGGAGCAGTTCCACCAATGGGAATGACACCTCAATGAGGTTGTCATCCTCCAAGGAGCTCTTGAGTATCTCTGGTGACATTTCTCCACAAGCAAGTCAACTGTGCAGTGAGAGTCGTTATTCAAGCCCTATTGCTTCTCCTTCTGCATACAATGTGGCTCCAATGGCCGGTTTTGAGCAACCTTCCATGGACAGTACTAGTGCTCCAAGCTTCTGGGTCTCCCCTGATATGATTCTTGATTCTTCAAAGGACAACTCACGAGCACAATTCTTTCCACAGTATGACTTACCAAGTACAATGACACCATGGCAATCATTGGAGCATACAGAAATTTCATCCAGTTCATCCTACTCAAATTTTAATGGGGAAACAGAATTTGCTGATGATCTCAGCCTGATTGGCTGCATGTCGCCTTACTCAGTACAAGGAAACTTTCTGGACTTCTATGGAAATGAGGAAGTGGTATATGAAGGATATGACCAGATCAATTCAATCACATACCCAAAACAATTCTAA 1056 0.447 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSSPATSTMTATGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQDSPCFQGAFALCRVIKKNEKANDSKGVGQKGKRGGSSSTNGNDTSMRLSSSKELLSISGDISPQASQLCSESRYSSPIASPSAYNVAPMAGFEQPSMDSTSAPSFWVSPDMILDSSKDNSRAQFFPQYDLPSTMTPWQSLEHTEISSSSSYSNFNGETEFADDLSLIGCMSPYSVQGNFLDFYGNEEVVYEGYDQINSITYPKQF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0871 351 MobiDBLite consensus disorder prediction 168 195 - -
Dod02g0871 351 SUPERFAMILY NAC domain 4 163 IPR036093 GO:0003677|GO:0006355
Dod02g0871 351 MobiDBLite consensus disorder prediction 177 195 - -
Dod02g0871 351 Pfam No apical meristem (NAM) protein 7 140 IPR003441 GO:0003677|GO:0006355
Dod02g0871 351 ProSiteProfiles NAC domain profile. 6 163 IPR003441 GO:0003677|GO:0006355
Dod02g0871 351 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 351 - -
Dod02g0871 351 Gene3D NAC domain 15 168 IPR036093 GO:0003677|GO:0006355
Dod02g0871 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0871 Dod-Chr2 11191986 11194540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0871 1 305 NAC Transcription Factor Family AT4G17980 54.808 4.04e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g0871 NAM 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0871 - - adu:107487585 572.392