Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0869 ATGAAGTTATCGTTGAAAAAAAGTGTAGCAATGTGTGCTGCTTGGCTTAGGGCTAACAAGAAACAGTTGCAGTCACAGCCCAAGGCCTTTCCCGGTGATAACACCGCATCTACAGCTGTTTCTGGGGCTGAAGCCCCGCCGGGGGTTTGGTCTGGTGACGCTCGCAATCCGAATGGCCAAGATGCTTTCAATGCTGTGATGAGTAAATTTCATGAGCTAAATCTTGATGAGTATGTGGGGAATCTTGTTGCAGGAGATAAGAAGGATGAGGTGATACTCACTCTTATTCATCAGGTTAAGGAACTTGAGAAAGAGGCCAAGGTCCGAAAGGATTGGGCTCTTGAGAAGGCAGTGCAAGCAGCAAGAAAGCTGAGCAGTAATTTGACTGATCTGAAAATGTTGAGGATGGAAAGAGAGGAGACTCAGAGATTGAAGAAAGGGAAACAAGCAGTTGAGGATACAACTATGAAGAGACTATCGGAGATGGAGGAAGCCTTGAGAAAGGCTAGTGGTCAAGTGGACCAGGCAAATGCAGCTGTCAAAAAACTAGAGACAGAGAATGCAGAAATCAAAGCAGAGTTGGAGGCAGCTAAATTAAGTTCATCAGAGTCTGTCAAAAGCTATATGCAAATCACCAAAAGGGAGAAGAAGTGCTTAAAGAAGCTTATAGCTTGGGAAAAACAGAAAGATAAGATGCAGCAGGAGATTTCAGATGAGAGACAGAAGATACTGGAGATTGAAGAAGAATTAGCTCGGATCAGACAGAGTGCAAAAGAAGCGGAGGTCAAGGGCAGGGAAGAGTTGAAGGCCAAAGAGGAAGCCTTAGCACAAATTGAGGAGGAACGCCGTTCTAAGGAAGCAGCGCAGGCTGAAAATAAGAGAAATCTTAAGGCTTTACGCCTGAAGATAGAGATAGATTTCCAGCGTCGCAAGGATGATCTCCAAAGGCTTGAGCAGGACCTTTCACGCCTCAAAGCATCTGCTCAGTCTGCTGTTTTGCATTATAGATCAAATACTTCCCCAGCAAGTGAGTCTGTGGGTGCAAAGCCCCAAAGGGAGACAATTGCTAAGCTTCTTCAAGAATTAGATAATCTAGAGGATTTTTCAGAAAAAGAAGTCAAAGGTGGTAGAGAATGTATCATATGTATGGAAGATGAAGTTTCAATCGTTTTCTTGCCATGTGCACACCAAGTTATGTGTGCTAGCTGTGGGGAAGAGTATGGGAGGAATAGCAAAGCTGCTTGTCCATGCTGCCGGGTTCCAATTGAACAGAGAATCCATGTATTTGGTGCAGGTACGTAA 1302 0.4455 MKLSLKKSVAMCAAWLRANKKQLQSQPKAFPGDNTASTAVSGAEAPPGVWSGDARNPNGQDAFNAVMSKFHELNLDEYVGNLVAGDKKDEVILTLIHQVKELEKEAKVRKDWALEKAVQAARKLSSNLTDLKMLRMEREETQRLKKGKQAVEDTTMKRLSEMEEALRKASGQVDQANAAVKKLETENAEIKAELEAAKLSSSESVKSYMQITKREKKCLKKLIAWEKQKDKMQQEISDERQKILEIEEELARIRQSAKEAEVKGREELKAKEEALAQIEEERRSKEAAQAENKRNLKALRLKIEIDFQRRKDDLQRLEQDLSRLKASAQSAVLHYRSNTSPASESVGAKPQRETIAKLLQELDNLEDFSEKEVKGGRECIICMEDEVSIVFLPCAHQVMCASCGEEYGRNSKAACPCCRVPIEQRIHVFGAGT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0869 433 MobiDBLite consensus disorder prediction 23 57 - -
Dod02g0869 433 MobiDBLite consensus disorder prediction 23 41 - -
Dod02g0869 433 ProSiteProfiles Zinc finger RING-type profile. 379 419 IPR001841 -
Dod02g0869 433 Pfam Zinc finger, C3HC4 type (RING finger) 377 424 - -
Dod02g0869 433 PANTHER OS05G0141500 PROTEIN 1 431 IPR046934 -
Dod02g0869 433 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 431 - -
Dod02g0869 433 SMART ring_2 379 418 IPR001841 -
Dod02g0869 433 Coils Coil 307 334 - -
Dod02g0869 433 SUPERFAMILY RING/U-box 357 425 - -
Dod02g0869 433 Coils Coil 222 298 - -
Dod02g0869 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 357 430 IPR013083 -
Dod02g0869 433 Coils Coil 159 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0869 Dod-Chr2 11179209 11182832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0869 379 429 C3H Transcription Factor Family AT1G73950 41.176 4.44e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0869 - - gmx:100777787 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0869 02 11179209 11182832 Dod05g1239 05 35280205 35287149 PCT