Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0866 ATGGATTCTCGGGAACCGCAACACCCACCTCCCTCCCACCACCACCACCACCACCACCACCATCAGCAGCAACAACAACAACAACCGCCTAACATCATGGTCGGCGTGGGATCCACCCCCTCCTCCTACCCAAACTCCATCATGGCCCCCGCCACCGCCCGATTCCCCTTCACCTCCCCCCTCCACCACCACCACCACCACCAACAACAACAACCACCCGCTCCCCCTAACAACAACCACAACAACAACCCTTCCGAGCCCTTCAACAACAGCAACAGCAACGCAAACAACAACGCTGCTGCCACTTACGATGGTGCCTCTTCCGCGTTGAAGCCGTGCGGGTTCCCCACCACTGACTCCTCCTCCGCCACCAAGAAGAAGAGGGGCCGCCCCAGGAAGTACTCTCCCGACGGCAACATTGCCTTGGGCCTCGCACCCACCCACGCCTCCCCTTCTCCCGCCTCCGCCCCCGCCGCACCACGCGCCGATTCCTCCGCTGGTGGCGGCACCGCCCCCTCATCGGAGCCCCTTGCGAAGAAGCATAGGGGGAGGCCACCTGGCTCTGGAAAGAAGCAGATGGATGCTCTTGGAGCTGGTGGGATTGGTTTTACACCTCACGTGATCTTGGTGGATGCTGGTGAGGACATTGCTGCTAAAATTATGGCCTTTTGTCAGCAAGGACCTAGGACCGTTTGCATTCTTTCTGCTAATGGTGCAATCTGCAATGTCTCCATTCGGCAGCCAGCAATGCTGGGGGGTACTGTGACATACGAGGGCCGATTTGAGATTATATCTCTGTCAGGTTCTTTACTACAGTCTGAGAATAATAGTGGTCATAGCAGATCGGGTGGCTTGAGTGTGTCCCTTGCAGGGTCTGATGGACGAGTTTTTGGTGGTGGAGTTGCTGGAGTGCTAACTGCAGCATCACCAGTGCAGGTCATTGTGGGTAGCTTTATTGCAGATGGCAAAAAGTCTAACAGCTCAAACAACCATAAATCTGGGCCTTCGTCAACGCCATCATCACAAATGTTAAATTTCGGTGCTCCTATGACTCCAACCAGTCCTACCTCTCAAGGGCCTTCATCTGAATCCTCTCCCTCTGATGACAATGATAATGGTCCTTTTAATAAGGGGCCTGGACTCTACAATAATGCTAGTCAGCCCATTCATAATATGCCAATGTACCATCATCAACTATGGGCTGGCCAAACTCAGCAGTGA 1221 0.5463 MDSREPQHPPPSHHHHHHHHHQQQQQQQPPNIMVGVGSTPSSYPNSIMAPATARFPFTSPLHHHHHHQQQQPPAPPNNNHNNNPSEPFNNSNSNANNNAAATYDGASSALKPCGFPTTDSSSATKKKRGRPRKYSPDGNIALGLAPTHASPSPASAPAAPRADSSAGGGTAPSSEPLAKKHRGRPPGSGKKQMDALGAGGIGFTPHVILVDAGEDIAAKIMAFCQQGPRTVCILSANGAICNVSIRQPAMLGGTVTYEGRFEIISLSGSLLQSENNSGHSRSGGLSVSLAGSDGRVFGGGVAGVLTAASPVQVIVGSFIADGKKSNSSNNHKSGPSSTPSSQMLNFGAPMTPTSPTSQGPSSESSPSDDNDNGPFNKGPGLYNNASQPIHNMPMYHHQLWAGQTQQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0866 406 ProSiteProfiles PPC domain profile profile. 199 340 IPR005175 -
Dod02g0866 406 MobiDBLite consensus disorder prediction 322 389 - -
Dod02g0866 406 MobiDBLite consensus disorder prediction 1 196 - -
Dod02g0866 406 SMART AT_hook_2 125 137 IPR017956 GO:0003677
Dod02g0866 406 SMART AT_hook_2 179 191 IPR017956 GO:0003677
Dod02g0866 406 Gene3D - 205 332 - -
Dod02g0866 406 PANTHER PPC DOMAIN-CONTAINING PROTEIN-RELATED 48 400 - -
Dod02g0866 406 SUPERFAMILY AF0104/ALDC/Ptd012-like 203 319 - -
Dod02g0866 406 MobiDBLite consensus disorder prediction 24 48 - -
Dod02g0866 406 MobiDBLite consensus disorder prediction 70 104 - -
Dod02g0866 406 CDD DUF296 204 318 IPR005175 -
Dod02g0866 406 Pfam Plants and Prokaryotes Conserved (PCC) domain 205 318 IPR005175 -
Dod02g0866 406 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 48 400 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0866 Dod-Chr2 11137729 11141771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0866 124 406 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 49.839 9.87e-79 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0866 - - qsu:112011718 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0866 02 11137729 11141771 Dod05g1231 05 35062647 35073447 PCT