Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0864 ATGGCTGGTTTGGATTTAGGCACAGCTTCACGCTTCGTTCAAAACCTCCACAGACCAGACTTTAACCTTCAGCACCATCAACACCAACACCAACACCAACAGCAGCAACAGCAACAACAAGATTCCGAGGAAGACGCCAACAACAACCAAGGTCCCTACGAGGATGGTCCCAACCAAGCAGGTCTCGAGCTGGCCTCAGCCTCCGGGGGCGACGTGGTGGGGCGGCGCCCAAGGGGGAGGCCGCCTGGTTCCAAGAACAAGCCGAAGCCGCCGGTGATCATAACGAGGGAGAGCGCAAACACGCTCCGCGCGCACATCCTCGAGGTGGCGAGCGGCTGCGACGTCTTCGAGAGCGTCGCCACCTACGCGCGGCGGCGCCAGCGCGGGATCTGCATCCTCAGCGGCAGCGGTACCGTCACCAACGTCAGCCTTCGCCAGCCCGCGGCTGCCGGAGCCGTCGTCACTCTCCACGGGAGGTTCGAGATACTATCTCTTTCCGGTTCCTTCCTGCCGCCGCCAGCTCCCCCGGGAGCCACCAGCTTGACAATATACCTTGCCGGAGGGCAGGGGCAGGTGGTGGGAGGGAGTGTGGTTGGGGAGTTGACCGCTGCGGGGCCTGTGATTGTCATCGCGGCTTCGTTCACCAACGTGGCTTATGAGAGGTTGCCTTTGGATGAGGAAGAACAGCTTCAGATGACGCCGCCAGCTGGTGGCGGTGGCGGTGGCGGAGGCCAGGGTTCCGGCGGCGGCGGTGGTAGTGGTGGGAATAATAACCCGTTTCCTGACTCGTCGTCGGGGCTTCCGTTCTTCAATTTGCCGCTGAATATGCAGAACGTTCAGTTGCCAGTGGATGGGTTTGCACGCCCATTCTGA 873 0.6163 MAGLDLGTASRFVQNLHRPDFNLQHHQHQHQHQQQQQQQQDSEEDANNNQGPYEDGPNQAGLELASASGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGCDVFESVATYARRRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEEEQLQMTPPAGGGGGGGGQGSGGGGGSGGNNNPFPDSSSGLPFFNLPLNMQNVQLPVDGFARPF* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0864 290 ProSiteProfiles PPC domain profile profile. 99 236 IPR005175 -
Dod02g0864 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 287 - -
Dod02g0864 290 MobiDBLite consensus disorder prediction 24 93 - -
Dod02g0864 290 MobiDBLite consensus disorder prediction 230 266 - -
Dod02g0864 290 MobiDBLite consensus disorder prediction 28 55 - -
Dod02g0864 290 CDD DUF296 103 186 IPR005175 -
Dod02g0864 290 Gene3D - 102 233 - -
Dod02g0864 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 231 - -
Dod02g0864 290 MobiDBLite consensus disorder prediction 250 266 - -
Dod02g0864 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 287 IPR014476 GO:0003680
Dod02g0864 290 PIRSF ESCAROLA 13 284 IPR014476 GO:0003680
Dod02g0864 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 216 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0864 Dod-Chr2 11119837 11121738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0864 1 286 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.445 1.31e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0864 - - pvu:PHAVU_003G230600g 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0864 02 11119837 11121738 Dod05g1227 05 34988813 34989711 PCT