Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0860 ATGGCTGCAGAGATTGGCCTCCTCTCCATGACCCAGATCCAGAAATTGTCACAATCCCAACACCACAAAAACCAGCCTCCTCCTCATCATCCACAAAACCCTAACTCCACCACCACCACAACAACAACAACTAGCATATCAACATCAACTTGGATGTGGAACCCTAGGGAATCACACCAAGAAGACGATGACTCGTGGGAGGTCAGGGCCTTCGCAGAGGACACGAGGAACATCATGGGAACCACGTGGCCTCCGAGGTCTTACACCTGCACCTTCTGCAGGAGGGAGTTCCGGTCAGCACAAGCCCTCGGCGGCCACATGAACGTGCACCGCCGCGACAGGGCTCGTCTCCACCAAGCGCCTCCACCGCTCGTCAGTGGTGGCGGCTCAGTCAACAACTCCATAAGCACATCTCAATATCACACACCGACATTCATAAATGTCCCACCTCAGGAGCTTGTTGCAAACGCTGGGTTGTGCTTCCTCTACCATTTGCCAAGCCCTAATACTGCGACCTTCCATTCTACTTCCACTCTGAATGCGAGTGGGGAATCTCCCTCCACTCTTCTCTCCATCTCATCATCATCTTCACCTCATCAACCACCAAACGGTAACTTGATGATGATGCAATCTTACCACCAGTCAGATGCAGCTACTACGGTTGGGAATGGGATCAACGACGTTTCTTCTTACTGCTATAATAACTCTAGCAAAGTGGTGGAAGAACGTGTTACCTCGTCCGTGAATAATAATGGCCTGCACCTCGAAGAGCTCGATCTAGAGCTCCGCTTGGGGCACAAGCCGACACCAACCTGA 816 0.5208 MAAEIGLLSMTQIQKLSQSQHHKNQPPPHHPQNPNSTTTTTTTTSISTSTWMWNPRESHQEDDDSWEVRAFAEDTRNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPPPLVSGGGSVNNSISTSQYHTPTFINVPPQELVANAGLCFLYHLPSPNTATFHSTSTLNASGESPSTLLSISSSSSPHQPPNGNLMMMQSYHQSDAATTVGNGINDVSSYCYNNSSKVVEERVTSSVNNNGLHLEELDLELRLGHKPTPT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0860 271 PANTHER OS07G0101800 PROTEIN 52 265 - -
Dod02g0860 271 PANTHER ZINC FINGER C2H2-TYPE/INTEGRASE DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 52 265 - -
Dod02g0860 271 MobiDBLite consensus disorder prediction 34 55 - -
Dod02g0860 271 MobiDBLite consensus disorder prediction 176 203 - -
Dod02g0860 271 SMART c2h2final6 88 110 IPR013087 -
Dod02g0860 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Dod02g0860 271 SUPERFAMILY beta-beta-alpha zinc fingers 85 115 IPR036236 -
Dod02g0860 271 Pfam C2H2-type zinc finger 88 112 - -
Dod02g0860 271 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Dod02g0860 271 MobiDBLite consensus disorder prediction 15 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0860 Dod-Chr2 11039580 11041083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0860 46 268 C2H2 Transcription Factor Family AT4G17810 38.961 1.00e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g0860 zf-C2H2_6 5.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0860 - - gmx:100818142 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0860 02 11039580 11041083 Dod02g0860 02 11039580 11041083 ECH