Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0850 ATGCGTGTCCTATTCTTTTTCTTCTTCCTCCTGCACTTCCACCACCACACATTCTCCGCTCCCATCTCCGAATACCGCGCCCTTCTCTCCCTCAAAGCCTCCATCTCCGACGCCACCCCACCGGTTCTCACTTCATGGAACGCCACCACCTCTTACTGCACCTGGCTCGGCGTCACCTGCGACTCCCGCCGCCATGTCACCGCCCTAGACCTCACCGGAATCGGCCTCTCCGGCACCTTCTCCGGGGACGTACTCTCCCACCTCCCTTTCCTCATCAACATCTCCCTCGCTGACAACACCTTCTCCGGCCCCATCCCCTCTTCCCTCTCCTCTCTCTCCTTCCTCCGATTCCTCAACCTCTCCAACAACGGCTTCAACGGCACCTTCCCTTCCTCACTTTCCACCCTCAACACCCTCCAAGTCCTCGACCTCTACAACAACAACCTCACCGGCGTTCTCCCTCTCGCCGTCACAAAAATGCAGTCTCTCCGCCATTTGCACCTCGGCGGAAACTACTTCTTCGGCCAGATCCCTAAGGAGTACGGAGCCTGGCCGCGTCTCGAGTATCTTGCCGTCTCCGGCAACGAGCTCACCGGAGCTATCCCGCCGGAGATCGGAAACCTTACCACTCTCCGGGAGCTTTACATTGGATACTTCAACGCCTACTCTGGCGGCATTCCGCCGGAGATTGGGAACCTTTCGGCGCTTGTGAGGTTCGATGCTGCAAACTGTGGATTAACCGGTGAGATTCCGGCGGAGATCGAGAAGCTTCAGAGCCTTGATACTCTGTTCCTTCAGGTGAATGCGCTTTCGGGGTCTTTGACGCCGGAGCTAGGGAGCTTGAAGAGCTTGAAATCGCTTGATTTGTCGAACAACGAACTTTCCGGGGAGATTCCGGCGAGTTTCGCGGAGCTGAAGAACCTTACGCTGCTGAACCTGTTCAGGAACAAGCTCCACGGTGAAATACCGGAGTTCATAGGGTCCTTGCCGGCGCTTGAGGTGCTTCACCTTTGGGAGAACAACTTCACCGGAAGCATTCCTCAGGGGTTGGGGAACAACGGGAGGCTCATCGACGTTGACCTTTCGTCGAACAAGTTGACCGGGACACTCCCTCCTCACGTGTGCAATGGGAACCGTTTACAGACTCTGATAACTCTCGGGAACTTCCTCTTTGGTCCAATCCCTGAATCGCTTGGGCGGTGTGAGTCCCTTAACAGGATTCGAATGGGTGAGAATTTCCTCAATGGGTCAATCCCAAAAGGCCTCTTTGGGCTCCCAGAACTCACACAGGTTGAGCTTCAGGACAATTATCTCACTGGGGTGTTCCCTGAAGGTGATGCTTTCTCTGCTAATCTTGGTCAGATTAGTCTTTCCAATAACCAGCTTTCTGGGCCGTTGCCACCTTCTATTGGGAACTTCTCCGGCATGCAAAAACTCCTCCTTGATGGCAACAAGTTCTCGGGTCAGATCCCAACCGAGATTGGGAGGTTGCAGCAGTTATCAAAGATTGATATTAGCCATAACACGCTCTCGGGTCCTATTCCTAAAGAGATTAGTCAGTGCAAGTTGTTAACTTTCGTTGATCTTAGCCGCAATGGGCTCTCTGGTGAGATTCCAAATGAGATCACTGGTATGAGGATACTCAACTACTTGAATCTCTCGAGGAACCATCTTGATGGCAACATTCCTGGGTCAATATCCACTATGCAAAGCTTAACTTCTGTTGATTTTTCGTATAACAATCTCTCTGGTTTGGTTCCTGGGACTGGTCAATTCAGCTACTTCAACTATACCTCTTTCCTTGGAAACCCAGAACTCTGTGGCCCTTATTTGGGTCCTTGCAAGGACGGTGTTGTCAATGGCGCTAACCAACCTCATGTCAAAGGCCCTCTCTCTTCTTCCATGAAGCTTCTACTTGTCATTGGGTTGCTTGTGTTCTCCATTGTCTTTGCTGTTGCAGCAATTCTGAAGGCTCGGTCTTTGAAGAAGGCCAGTGAGGCACGTGCATGGAAACTGACTGCATTCCAGCGCTTGGACTTCACTGCTGATGATGTTTTGGATTGCTTGAAGGAGGACAACATAATAGGGAAGGGAGGTGCAGGAATTGTGTACAAGGGTGCAATGCCTAATGGGGATCAGGTTGCTGTGAAGAGGCTTCCAGCTATGAGCAGAGGCTCTTCCCATGATCATGGTTTCAATGCAGAGATTCAGACATTGGGAAGGATCCGACATAGGCACATTGTTAGGCTACTTGGTTTCTGTTCAAACCATGAGACCAATCTTTTGGTCTATGAGTACATGCCCAATGGAAGTTTAGGTGAGGTGCTTCATGGGAAGAAAGGGGGTCATTTGCATTGGGACACCAGGTATAAGATTGCTGTGGAGGCTGCAAAGGGGCTTTGCTATCTGCACCATGATTGTTCCCCACTTATTGTTCATCGTGATGTGAAATCAAACAACATCCTTCTTGACTTCTAG 2478 0.5125 MRVLFFFFFLLHFHHHTFSAPISEYRALLSLKASISDATPPVLTSWNATTSYCTWLGVTCDSRRHVTALDLTGIGLSGTFSGDVLSHLPFLINISLADNTFSGPIPSSLSSLSFLRFLNLSNNGFNGTFPSSLSTLNTLQVLDLYNNNLTGVLPLAVTKMQSLRHLHLGGNYFFGQIPKEYGAWPRLEYLAVSGNELTGAIPPEIGNLTTLRELYIGYFNAYSGGIPPEIGNLSALVRFDAANCGLTGEIPAEIEKLQSLDTLFLQVNALSGSLTPELGSLKSLKSLDLSNNELSGEIPASFAELKNLTLLNLFRNKLHGEIPEFIGSLPALEVLHLWENNFTGSIPQGLGNNGRLIDVDLSSNKLTGTLPPHVCNGNRLQTLITLGNFLFGPIPESLGRCESLNRIRMGENFLNGSIPKGLFGLPELTQVELQDNYLTGVFPEGDAFSANLGQISLSNNQLSGPLPPSIGNFSGMQKLLLDGNKFSGQIPTEIGRLQQLSKIDISHNTLSGPIPKEISQCKLLTFVDLSRNGLSGEIPNEITGMRILNYLNLSRNHLDGNIPGSISTMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVVNGANQPHVKGPLSSSMKLLLVIGLLVFSIVFAVAAILKARSLKKASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDF* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0850 825 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Dod02g0850 825 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 824 - -
Dod02g0850 825 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 824 - -
Dod02g0850 825 Pfam Leucine rich repeat 115 172 IPR001611 GO:0005515
Dod02g0850 825 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
Dod02g0850 825 Gene3D Ribonuclease Inhibitor 502 614 IPR032675 -
Dod02g0850 825 Pfam Protein kinase domain 691 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0850 825 Gene3D Ribonuclease Inhibitor 22 219 IPR032675 -
Dod02g0850 825 Gene3D Ribonuclease Inhibitor 378 501 IPR032675 -
Dod02g0850 825 Gene3D Ribonuclease Inhibitor 220 375 IPR032675 -
Dod02g0850 825 SMART serkin_6 689 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0850 825 ProSiteProfiles Protein kinase domain profile. 689 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0850 825 SUPERFAMILY L domain-like 298 614 - -
Dod02g0850 825 Gene3D Transferase(Phosphotransferase) domain 1 767 825 - -
Dod02g0850 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Dod02g0850 825 SMART LRR_typ_2 329 353 IPR003591 -
Dod02g0850 825 SMART LRR_typ_2 497 521 IPR003591 -
Dod02g0850 825 SMART LRR_typ_2 136 159 IPR003591 -
Dod02g0850 825 SMART LRR_typ_2 281 304 IPR003591 -
Dod02g0850 825 SMART LRR_typ_2 569 592 IPR003591 -
Dod02g0850 825 SUPERFAMILY RNI-like 69 391 - -
Dod02g0850 825 SUPERFAMILY Protein kinase-like (PK-like) 685 824 IPR011009 -
Dod02g0850 825 PRINTS Leucine-rich repeat signature 139 152 - -
Dod02g0850 825 PRINTS Leucine-rich repeat signature 281 294 - -
Dod02g0850 825 Gene3D Phosphorylase Kinase; domain 1 656 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0850 Dod-Chr2 10895024 10897501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0850 16 824 Receptor kinase-like Gene Family AT5G65700 80.661 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod02g0850 Pkinase 4.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0850 - - ccaj:109800149 1366.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0850 02 10895024 10897501 Dod05g1218 05 34635262 34639266 PCT