Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0844 ATGCAGGAGAACGCGTTCACCGGAGAGATTCCCAGTAATGTGAGCTCCTGGACCGAGTTGACCGGGTTGAACTTGTCTCACAACCGATTCTCTGGTTCGATCCCACGGGAACTCGGTGATCTGCCGATGTTGACTTACCTTGACCTAGACGGAAATTTGTTGACCGGGGAGATTCCGGTGGAGTTAACGAACCTCACGCTCAACCAGTTCAATGTATCAGGGAACAGGTTGTATGGTGAAGTGCCTTCAGGTTTTAACCACCAAGTGTACTTGTCGGGTCTAATGGGTAACCCTGGTCTATGTAGCCCAGTTATGAAACCCCTTCCTCCTTGTTCCCAACGCAGACCCTTTTCTCTGATTGCTATAATCGTTTTGTCTGCTTGTGTTGTGCTCCTTCTTGGGTCTTTGTTGTGGTTCTTGAAGAGCAAGTCACTTCCTTTTGATGGCAAGTCCAAGCGCTCCTTTAAAACAACCACTTTCCAAAGGGTTGGTTTCAATGAGGAAGACATTGTTCCGTTGTTAACTAATGAGAATGTAATTGGGTCAGGTAGTTCGGGTCGGGTCTACAGGGTGAAGCTCAAGACGGGTCAGACAGTGGCAGTGAAGAAGCTCTGGGGAGGAACGCAAAATCCAGACACTGAATTGGTGTTCAGGTCTGAGATTGAGACATTGGGATCGATTAGGCATGCTAATATTGTGAAGCTCTTGTGCAGTTGCAGTGCTGATGACTTCAGAATATTGGTGTACGAGTACATGGAGAATGGGAGCTTGGGTGATGTTTTGCATGAGGGGAAGTGTAGGGAGTTGATGGATTGGTCCAAGAGGTTCACCATTGCTGTGGGTGCGGCTCAGGGTTTGGCTTATCTGCACCATGATTGTGTGCCGGCTATAGTTCATAGGGATGTGAAGAGCAGTAACATATTGCTGGACCATGAGTTTAGGCCTCGTGTTGCTGACTTTGGGCTGGCTAAGACCTTGCAGCGTGAAGGAGGAAGTGGTGCTGATGCTATGTCCAGAGTTGCTGGATCGTATGGTTACATTGCTCCAGAGTATGCTTATACACTGAAGGTAACTGAGATGAGTGATGTCTATAGTTTTGGCGTGGTTCTGATGGAAGTGATCACGGGCAAGAGGCCAAATGACCCTTCATTTGGTGAGAACAAGGATATAGTGAAGTGGGTCACTGAGACTGCTTTGTTATCATCTGTTGAAGCAGAAACTGACAATATTGGAGGAGGTCACGGCTGTATTGTGACTAAGATTATAGACCCAAGATTGAACCCAGCCACCTGTGATTATGAAGAGGTTGAGAACGTTCTAAATGTGGCCCTACTTTGCACTTCAGCATTTCCCATTAACAGACCCTCAATGAGAAGGGTGGTTGAATTGCTAAAGGACCATAAACTAGCTCGTCCCAAGTCATGA 1425 0.4716 MQENAFTGEIPSNVSSWTELTGLNLSHNRFSGSIPRELGDLPMLTYLDLDGNLLTGEIPVELTNLTLNQFNVSGNRLYGEVPSGFNHQVYLSGLMGNPGLCSPVMKPLPPCSQRRPFSLIAIIVLSACVVLLLGSLLWFLKSKSLPFDGKSKRSFKTTTFQRVGFNEEDIVPLLTNENVIGSGSSGRVYRVKLKTGQTVAVKKLWGGTQNPDTELVFRSEIETLGSIRHANIVKLLCSCSADDFRILVYEYMENGSLGDVLHEGKCRELMDWSKRFTIAVGAAQGLAYLHHDCVPAIVHRDVKSSNILLDHEFRPRVADFGLAKTLQREGGSGADAMSRVAGSYGYIAPEYAYTLKVTEMSDVYSFGVVLMEVITGKRPNDPSFGENKDIVKWVTETALLSSVEAETDNIGGGHGCIVTKIIDPRLNPATCDYEEVENVLNVALLCTSAFPINRPSMRRVVELLKDHKLARPKS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0844 474 Pfam Leucine rich repeat 12 54 IPR001611 GO:0005515
Dod02g0844 474 Gene3D Ribonuclease Inhibitor 1 116 IPR032675 -
Dod02g0844 474 SMART serkin_6 174 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0844 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Dod02g0844 474 ProSitePatterns Protein kinases ATP-binding region signature. 180 203 IPR017441 GO:0005524
Dod02g0844 474 ProSiteProfiles Protein kinase domain profile. 174 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0844 474 Pfam Protein kinase domain 176 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0844 474 SUPERFAMILY Protein kinase-like (PK-like) 174 464 IPR011009 -
Dod02g0844 474 Gene3D Transferase(Phosphotransferase) domain 1 252 472 - -
Dod02g0844 474 SUPERFAMILY L domain-like 4 91 - -
Dod02g0844 474 Gene3D Phosphorylase Kinase; domain 1 155 251 - -
Dod02g0844 474 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 469 - -
Dod02g0844 474 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0844 Dod-Chr2 10827404 10829370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0844 4 94 Receptor kinase-like Gene Family AT5G65710 28.448 1.04e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod02g0844 Pkinase 4.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0844 - - gmx:100813889 723.005