Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0834 ATGGGTCTTGATCATCATGCCAATAACTCAAGCCTTGAGCTTGTTCTAGGATTATCTCTGACTCGTACTGCTGCTGCAGAGGAAACCACTACTACTCCACCTCCTCCATCAAGCAAACCCGCAGGTGATAATCTTTGTATCAAGCCAACGCCAATGAAGCCTTATTCCTCAAATTTCATCATCACAGCAAGTAACACTGAAGCTGAGCCATCTTTAACGCTGGGTCTTTCTGGTGAGAGTTACCAGCAACATCAGCAGGTGATACCTCAGAACCAAGTTCCCAAGAACAAGATGGATATTGGGAATAATAACAACAACAAGGTTCTTTACAGTGAGGACCCTGTTGAACTGTCTAGACAGACTTCACCTCACAGCGTTGTTTCGTCCTTCTCCAGTGCCAGGGTGGTCAAGAGGGAGAGGGATATTAGCTGTGAAGAGGCAGAGATAGACGCTGCAGATAGAATTTCTTCCAGAGTGAGTGATGAAGATGAAGACGGCACCAATGCCAGAAAGAAACTCAGGCTTACCAAAGAGCAATCTGCGCTGCTAGAGGAGAGCTTCAAACAACACAGCACTCTCAATCCTAAACAGAAGGAAGCTTTGGCCAGGCAGTTAAATCTACGGGCTCGACAAGTTGAAGTGTGGTTCCAGAATCGGAGAGCTAGAACAAAGCTGAAGCAGACGGAGGTGGACTGCGAGTTCCTAAAGAAGTGCTGCGAGACGTTGACGGACGAGAACAGGAGACTTAAGAAGGAGCTGCAGGAGCTAAAGGCACTGAAGCTGGCGCAGCCCTTGTACATGCCTATGCCTGCCGCCACACTCACCATGTGCCCTTCTTGCGAGAGGCTCAACGACACCGCTCCCAATAAGACCCCCTTCTCCATCGCTCCAAAGCCTCACTTCTATAATCCCTTCACCAATCCTTCCGCAGCATGTTGA 939 0.4878 MGLDHHANNSSLELVLGLSLTRTAAAEETTTTPPPPSSKPAGDNLCIKPTPMKPYSSNFIITASNTEAEPSLTLGLSGESYQQHQQVIPQNQVPKNKMDIGNNNNNKVLYSEDPVELSRQTSPHSVVSSFSSARVVKRERDISCEEAEIDAADRISSRVSDEDEDGTNARKKLRLTKEQSALLEESFKQHSTLNPKQKEALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMPAATLTMCPSCERLNDTAPNKTPFSIAPKPHFYNPFTNPSAAC* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0834 312 CDD homeodomain 170 227 IPR001356 GO:0003677
Dod02g0834 312 SMART halz 226 269 IPR003106 GO:0006355|GO:0043565
Dod02g0834 312 Pfam Homeobox associated leucine zipper 226 260 IPR003106 GO:0006355|GO:0043565
Dod02g0834 312 PANTHER - 35 312 - -
Dod02g0834 312 ProSiteProfiles 'Homeobox' domain profile. 166 226 IPR001356 GO:0003677
Dod02g0834 312 ProSitePatterns 'Homeobox' domain signature. 201 224 IPR017970 GO:0000981|GO:0006355
Dod02g0834 312 MobiDBLite consensus disorder prediction 23 44 - -
Dod02g0834 312 Gene3D - 163 231 - -
Dod02g0834 312 Coils Coil 232 262 - -
Dod02g0834 312 SMART HOX_1 168 230 IPR001356 GO:0003677
Dod02g0834 312 SUPERFAMILY Homeodomain-like 160 227 IPR009057 -
Dod02g0834 312 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 35 312 - -
Dod02g0834 312 Pfam Homeodomain 170 224 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0834 Dod-Chr2 10759440 10761143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0834 1 312 Homeobox Transcription Factor Family AT4G37790 55.623 1.48e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod02g0834 Homeodomain 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0834 K09338 - gmx:100795135 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0834 02 10759440 10761143 Dod05g1209 05 34385719 34387132 PCT