Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0806 ATGGATACCTTGTTTAGGCTAGTAAGTTTCCAACAACACCAACAACAGCAAGATCAATCCCTCAATTCTACCACAAGCAGAACATCAAGCAGCTCTAGATCCTCCCGACAAAACTATCACCACCACTACCACCAACAACAACCAGAAGAAGACGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTCTCCTCGTCTTCTTCCAGGCACTACTATCCCTATCATCATCAGCCCCACCACCCATCCACCACCACAACCACCCCCACCACCACCATCCCCACCACCCTCACCCCCACTCCAACCACCACCACCGACTTCTCCTTCTCCCCCACCCGCGACCTCAACTTCAACCTCGAATTCTCGTCCAACAACAAGTGGTCACACGACATCCTCCTAGAAACCGCACGTGCCATCGCCGACAAGAACAGCGCACGTGTTCAGCAACTCATGTGGATGCTCAACGAGCTCAGCACCCCTTACGGCGACACTGAGCAGAAGCTCGCCTCTTACTTCCTCCAAGCACTCTTCAGCCGCATGACACACGCAGGGGACAGAACCTTCCGAACCCTAACCTCAGCCTCCGAGAAAACGTGCTCCTTCGAATCAACAAGAAAGACAATGCTCAAGTTCCAAGAGGTTAGCCCATGGACAACATTCGGACACGTGGCATCCAATGGTGCCATCTTGGAGGCCTTAGAAGGAGAACCCAAGTTGCACATAGTTGATATTAGCAACACCTATTGCACCCAATGGCCTACGCTCTTCGAAGCCTTGGCCACTCGCTCCGACGACACCCCGCACCTGAGGCTGACCACCGTGGTCACCACCGCCTCACGGCGGCTCCGTCTCGGCGGCGCAGAAGGTCATGAAGGAGATAGGTGCCAGGATGGAGAAGTTCGCGAGGCTCATGGGCGTTCCCTTCAAGTTCAACGTCATTCACCATGA 951 0.5363 MDTLFRLVSFQQHQQQQDQSLNSTTSRTSSSSRSSRQNYHHHYHQQQPEEDEEECFNFFMDEEDLSSSSSRHYYPYHHQPHHPSTTTTTPTTTIPTTLTPTPTTTTDFSFSPTRDLNFNLEFSSNNKWSHDILLETARAIADKNSARVQQLMWMLNELSTPYGDTEQKLASYFLQALFSRMTHAGDRTFRTLTSASEKTCSFESTRKTMLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRSDDTPHLRLTTVVTTASRRLRLGGAEGHEGDRCQDGEVREAHGRSLQVQRHSP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0806 316 MobiDBLite consensus disorder prediction 69 108 - -
Dod02g0806 316 PANTHER PROTEIN SHORT-ROOT 1 278 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Dod02g0806 316 MobiDBLite consensus disorder prediction 1 36 - -
Dod02g0806 316 MobiDBLite consensus disorder prediction 1 52 - -
Dod02g0806 316 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 278 IPR005202 -
Dod02g0806 316 ProSiteProfiles GRAS family profile. 120 316 IPR005202 -
Dod02g0806 316 Pfam GRAS domain family 131 279 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0806 Dod-Chr2 10458770 10459720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0806 1 278 GRAS Transcription Factor Family AT4G37650 54.882 3.59e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod02g0806 GRAS 1.8e-43 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0806 - - pvy:116131348 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0806 02 10458770 10459720 Dod02g0806 02 10458770 10459720 ECH