Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0805 ATGGGGAAGAAGCAGCACAGCAAAGACCGGATGTTCATCACGAAAACGGAGTGGGCTACCGAATGGGGTGGCGCCAAATCCAAAGAGAATCGCACCCCTTTCAAACGCCTTCCTTTCTATTGCTGCGCGTATTTTATTTTCTATCACTCCCTCACTCTTTTTTACCTTCCTCCTTTTTCACTCCTATTTTCATTCACCTTCTCTTCTTTTTCCTCTATTTTTGTATTCAGGCTTACGTTTACGCCGTTTGAGTATCCAGTGTGCACAGCTGATGGGAGTGTTTTCGATGTTATGAACATAACCCCTTATATTATTAAATATGGAAAACATCCTGTCACTGGAGCTCCGCTTAAGCAGCAGGATCTCATACCACTAACTTTCCACAAGAATTCTGAAGGAGAATATCATTGTCCAGTGCTAAACAAAGTTTTCACAGAATTTACACATATAGTGGCAGTGAAGACCACAGGAAATGTGTTTTGCTATGAGGCTGTTAAAGAATTGAATATCAAGACCAAAAACTGGAAGGAACTCCTCACTGATGAGCCATTCATTAAGGATGACCTTATAACAATTCAGAATCCTAATGCACTTGATAGCAAGGTTCTTGTGGATTTTGATCATGTTAAAAATAGTTTGAAAGTTGATGATGAAGAAATACAGAAAATTAAATCAGATCCAACCTATAACATAAATGTGTCGGGAGATATCAAACAAATGCTTCAGGAGCTTGGAACTGAGAAAGGAAAGGAAACTGCAATGCATGGGGGAGGTGGGGGCAAGGCTCAAAATGAAAGGGCTGCTGCACTTGCTGCAATCTTAGCTGCAAGGTCACGTGTTAAAGAAGATTCCAAATCAAATCAAAATGGAGAGGCCAAAGCTCCTCAGGCATTTAGTATTGTAGATGCTGCATCTGCTTCCGTTCATGGAAGAAGTGCAGCCGCCGCTAAAGCCTCAGCTGGTGATAAAACTGCTGCTAGAATAGCTATGCACATGGCTGGTGATAGGGTGCCAGTGAATGCAAAGCTGGTGAAAAGCCGTTTCACTACTGGTGCTGCCGCCCGTTCTTTCACTTCAACATCATTTGATCCAGTTACAAAAAATGAATTTGAATATGTGAAAGTTGAGAAGAATCCAAAGAAGAAAGGATATGTGCAACTGCATACGACACATGGTGATTTGAATATTGAGCTGCACTGTGATATAACGCCCAGGACATGTGAGAACTTTATCACACTCTGTGAACGTGGATATTATAATGGAGTTGCTTTTCATAGAAACATTCGGAATTTTATGATACAAGGTGGTGATCCTACTGGTACTGGTAGAGGAGGTGAATCAATATGGGGAAAGCCTTTTAAAGATGAACTGCACTCCAAATTAGTTCACTCTGGAAGGGGTGTGGTTAGCATGGCAAACAGTGGTCCACACACTAATGGTTCCCAGTTTTTCATCTTGTACAAGTCTGCAAATCATTTAAACTTTAAACACACAGTTTTTGGAGCAGTTGTTGGTGGCTTGACTGCATTAGCAGCAATGGAAAAGGTTCCTGTTGATGATGATGACCGACCCCTGGAGGAAATCAAGATAACAAGTGTCACAATTTTTGTCAACCCTTACACAGAACCAGATGAGGAAGAAGAGAAAGATAATGCCAAGGAGAAAGCTGAGGAGGATGAGGATAATAGTAAGGTTGGGTCATGGTATAGCAACCCTGGTGCTGGAACATCGGAATCTGGAGGTACGGGTGTTGGTGGTGGCGTTGGCAAGTACTTGAAAGCCAGGAATGTTCAACCTGTTGACAACAGTACAGCCGTAGGAGGAAAGAAAAGAAAAGCGGGAGTTGCCAGTGGTGAATTTAAAGATTTTTCTGCATGGTAA 1881 0.42 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKRLPFYCCAYFIFYHSLTLFYLPPFSLLFSFTFSSFSSIFVFRLTFTPFEYPVCTADGSVFDVMNITPYIIKYGKHPVTGAPLKQQDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEPFIKDDLITIQNPNALDSKVLVDFDHVKNSLKVDDEEIQKIKSDPTYNINVSGDIKQMLQELGTEKGKETAMHGGGGGKAQNERAAALAAILAARSRVKEDSKSNQNGEAKAPQAFSIVDAASASVHGRSAAAAKASAGDKTAARIAMHMAGDRVPVNAKLVKSRFTTGAAARSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCERGYYNGVAFHRNIRNFMIQGGDPTGTGRGGESIWGKPFKDELHSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGAVVGGLTALAAMEKVPVDDDDRPLEEIKITSVTIFVNPYTEPDEEEEKDNAKEKAEEDEDNSKVGSWYSNPGAGTSESGGTGVGGGVGKYLKARNVQPVDNSTAVGGKKRKAGVASGEFKDFSAW* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0805 626 Gene3D - 363 549 IPR029000 -
Dod02g0805 626 CDD RING-Ubox_PPIL2 78 144 IPR026951 -
Dod02g0805 626 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 388 535 IPR002130 GO:0000413|GO:0003755
Dod02g0805 626 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 419 436 IPR020892 GO:0003755|GO:0006457
Dod02g0805 626 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 78 624 IPR044666 -
Dod02g0805 626 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 2 43 - -
Dod02g0805 626 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 43 IPR044666 -
Dod02g0805 626 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 130 IPR013083 -
Dod02g0805 626 SUPERFAMILY RING/U-box 78 138 - -
Dod02g0805 626 Coils Coil 542 562 - -
Dod02g0805 626 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 482 494 IPR002130 GO:0000413|GO:0003755
Dod02g0805 626 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 467 482 IPR002130 GO:0000413|GO:0003755
Dod02g0805 626 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 398 413 IPR002130 GO:0000413|GO:0003755
Dod02g0805 626 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 424 436 IPR002130 GO:0000413|GO:0003755
Dod02g0805 626 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 495 510 IPR002130 GO:0000413|GO:0003755
Dod02g0805 626 CDD cyclophilin_RING 384 542 - -
Dod02g0805 626 ProSiteProfiles U-box domain profile. 69 142 IPR003613 GO:0004842|GO:0016567
Dod02g0805 626 SUPERFAMILY Cyclophilin-like 384 544 IPR029000 -
Dod02g0805 626 MobiDBLite consensus disorder prediction 539 626 - -
Dod02g0805 626 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 78 624 - -
Dod02g0805 626 SMART Ubox_2 75 135 IPR003613 GO:0004842|GO:0016567
Dod02g0805 626 MobiDBLite consensus disorder prediction 546 564 - -
Dod02g0805 626 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 384 534 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0805 Dod-Chr2 10446854 10452144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0805 1 626 U-box Gene Family AT5G67530 71.698 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0805 K10598 - gmx:100819923 1005.74