Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0802 ATGAAGTTCAATCCAAGGGTTTCAAGCAGCCGCCGGAAGAGCCGCAAGGCGCACTTCACGGCGCCGTCGAGCGTCCGGCGCGTGCTGATGAGCGCACCTCTCTCGAGCGACCTCCGGTCCAAGTACAACGTGCGCTCCATCCCGATCCGAAAGGACGACGAGGTTCAGGTTGTTAGGGGAACCTTCAAGGGCCGCGAAGGCAAGGTTGTTCAGGTTAACGGCCAAACCGTCAACGTTGGTATCCACCCTTCCAAGGTTGTCGTCACGAAGCTCCGCTTTGACAAGGACAGGAAGTCCTTGCTTGATCGAAAGGCCAAGGGTCGTGCTGCTGCTGACAAGGAGAAGGCCTTGGTGGTCAAAGCTCGGGTGCTTGGTCAAACCGGGTCGCTGGCACGGGTTTGGTGGGCCGGTTCACCGGTTCGCTCGTGGATTGATCCGGGTTTGACCGGTTCAAATGCAGAAGCTGTCCAATCAGAGAACCGAACCGGTCCAATCAGAGAACCGAACCGGTCCAGTGACCGGTTCACCGGTTTCCGGTCCGAACCGGCCGGTCCGGTCCGTAATGTTTGTTGCTCGAGGATGCTGGCTTGGTCGCCAATGGCAACCTTTGGCAGGCTCATCACGAGAAGGCCCTGGCAAGTGGCAAACACTGAAAAATACTGA 663 0.5807 MKFNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSIPIRKDDEVQVVRGTFKGREGKVVQVNGQTVNVGIHPSKVVVTKLRFDKDRKSLLDRKAKGRAAADKEKALVVKARVLGQTGSLARVWWAGSPVRSWIDPGLTGSNAEAVQSENRTGPIREPNRSSDRFTGFRSEPAGPVRNVCCSRMLAWSPMATFGRLITRRPWQVANTEKY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0802 220 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g0802 220 MobiDBLite consensus disorder prediction 151 174 - -
Dod02g0802 220 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 104 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod02g0802 220 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 71 122 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod02g0802 220 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 72 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod02g0802 220 Gene3D - 1 122 IPR014722 -
Dod02g0802 220 SUPERFAMILY Translation proteins SH3-like domain 8 108 IPR008991 -
Dod02g0802 220 MobiDBLite consensus disorder prediction 151 165 - -
Dod02g0802 220 PANTHER 60S RIBOSOMAL PROTEIN L26-1 71 122 - -
Dod02g0802 220 PANTHER 60S RIBOSOMAL PROTEIN L26-1 1 72 - -
Dod02g0802 220 SMART kow_9 48 75 IPR005824 -
Dod02g0802 220 TIGRFAM rplX_A_E: ribosomal protein uL24 8 72 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod02g0802 220 CDD KOW_RPL26 52 88 IPR041988 GO:0003723
Dod02g0802 220 ProSitePatterns Ribosomal protein L24 signature. 52 69 IPR005825 GO:0003735|GO:0005840|GO:0006412
Dod02g0802 220 Pfam KOW motif 51 79 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0802 Dod-Chr2 10411442 10414786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0802 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 73.684 1.41e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0802 K02898 - gmx:100819391 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0802 02 10411442 10414786 Dod02g0802 02 10411442 10414786 ECH