Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0799 ATGGAGGGTTATTTGCATGAGGATTTTGGGGGAGTGAAGGCGAAGAACTCGGATAAAGAGGCTCTTCGACGATGGAGGCAGGCATGCGGATTCGTGAAGAACGAGAAGAGACGATTTCGTTTCACTGCCAATCTCCGCAAGAGAGACGAAGCAGCTGCTATGCGTCTCACCAATAAGGAGAAGCTGAGGGTGGCAGTTTTGGTTTCCCAAGCTGCATTTCAATTTATCCAACGCGCACAACAAAGCGATTACAATGTACCTGAGGAAGTTAAAGCTGCAGGTTTTGAAATCTGTGGTGATGAATTGGGGTCTATTGTTGAACGCCATGATGTAGAGAAGCTAAAATATCATGGTGGGGTTAGTGGTATTGCAGAAAAGCTTTCTACATCAACCACCAAGGGGCTTAGCAGTGATCCTGATTTTCTAAATAGGAGACAGCAGGTATATGGAATAAACAAGTTTACTGAAAGTGAAGCCAAGAGTTTCTGGGTTTTTGTTTGGGAAGCCCTTCAAGACATGACTCTCATGATACTTGGAGTGTGTGCTTTTGTGTCTCTCATAGTTGGCATTGCAACAGAAGGGTGGCCCAAGGGGGCACATGATGGTCTTGGGATTGTTGCAAGTATTTTACTGGTTGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCATTGCAATTCAAAGACTTAGACAAGGAGAAGAAGAAGATTTCCATTCAGGTCACAAGAAATGGTTATAGGCAGAAAATGTCAATCTATGAATTACTTCCTGGTGATATTGTGCATCTTGCCATTGGTGACCAAGTCCCTGCTGATGGACTGTTTGTTTCTGGATTTTCTGTGTTGATTGATGCGTCAAGTTTAACAGGTGAGAGCGAGCCCGTGATGGTTAATTCTGAAAATCCATTTCTTCTTTCTGGAACAAAGGTCCAAGATGGATCATGCAAGATGTTGGTTAGCACTGTTGGAATGAGGACTGAATGGGGCAAGTTGATGGCAACTCTGAGTGAAGGCGGAGATGATGAAACCCCATTGCAAGTGAAATTGAATGGAGTTGCAACCATTATTGGGAAGATAGGCCTCTTCTTTGCCTTGATTACTTTTGCAGTTCTGGTGCAAGGACTGGTGAGCCGTAAGCTCCAACAAGGAAGCTTATGGAGCTGGAACGGGGATGATGCTTTGATGATGTTGGAATTCTTTGCCGTTGCTGTTACCATTGTTGTTGTTGCTGTTCCCGAGGGGCTGCCATTGGCTGTGACATTGAGCCTTGCATTTGCCATGAAGAAGATGATGAATGACAAAGCCCTTGTGAGGCATTTGGCAGCATGTGAGACCATGGGATCAGCCACAACTATATGCAGTGACAAGACTGGGACACTAACAACAAACCATATGACTATTGTGAAAACATGCATTTGTATGAATAGCAAGGAAGTGAGCAATAATAAGGCTTCTACTTTGTGTTCTGAACTTCCAGATTCTGCTATGAAACTGCTCCTACAGTCAATATTCAACAACACAGGAGGAGAGGTTGTTGTTAACCAAGATGGAAAACACGAGATTCTAGGGACCCCAACTGAGACTGCAATATTGGAGTTTGGCTTGTCACTTGGTGGCGATTTTCAAGGGGAGAGACAAGCATGCAAGCTTGTTAAAGTTGAGCCATTCAACTCTACTAAAAAGAAAATGAGTGTTGTGGTGGAGCTCCCTGGTGGAGGATTACGCGCACATTGCAAAGGTGCTTCTGAGATAATTCTGGCCTCTTGTGACAAGGTGCTGAACTCAGATGGTGAGGTTGTCCCTCTTGATGAAGGATCAAGTAACCATCTTAAGGCTACAATAAACCAGTTTGCTAATGAGGCACTCAGAACCCTATGCCTTGCCTACATGGAATTGGAAAATGGATTCGCTGCTGAGGACCCAATTCCTGTTTCTGGTTATACTTGTATAGGGATTGTTGGTATCAAAGATCCTGTTCGTCCCGGTGTTAAGGAATCTGTAGCAGTATGTCGTTCTGCTGGAATAACAGTAAGGATGGTTACAGGAGATAACATTAATACTGCAAAGGCTATAGCTAGGGAATGTGGAATTTTAACAGATGATGGAATAGCCATTGAAGGCCCTGAATTTAGAGAGAAGAGTGAGGAGGAATTGCTTCAGCTCATTCCCAAAATTCAGGTTGCAAAAGAAAGTGCAGATGTCATAATTCTGGATGATAACTTCTCCACAATAGTGACAGTGGCCAAATGGGGACGTTCAGTGTACATAAATATTCAAAAATTTGTACAGTTCCAGCTAACTGTTAATGTGGTTGCATTGATAGTGAACTTCACATCAGCCTGCATGACAGGAAGTGCACCCCTCACAGCTGTTCAACTTTTGTGGGTGAACATGATAATGGACACACTAGGAGCACTAGCACTTGCAACTGAACCTCCGAATGATGAATTGATGAAGCGTTCACCTGTGGGAAGGAAGGGGAATTTCATCAGCAGTGTCATGTGGAGGAACATATTGGGACAATCAGTGTATCAGTTCATGGTCATATGGTTCCTTCAGTCAAATGGAATATCGGTATTTTCCCTTAGTGGCCCCGACACGGATCTGGTCTTGAACACACTTATTTTCAACTCATTTGTCTTCTGTCAGGTTTTCAATGAGATAAACTCACGTGAGATGGAGGAAGTAGATGTCTTCAAAGGCATATTGAATAACTATGTATTCGTGGGTGTCATCGGTGCTACTGTTGTGTTTCAAATCATAATAATTGAGTACCTGGGAACTTTTGCAAACACAACACCTCTCACTCTGATACAGTGGTTCTTCAGCTTGTTTGTTGGATTTTTGGGCATGCCAATTGCAGCTGCCTTAAAGAAGATCCCTGTCTGA 2889 0.4337 MEGYLHEDFGGVKAKNSDKEALRRWRQACGFVKNEKRRFRFTANLRKRDEAAAMRLTNKEKLRVAVLVSQAAFQFIQRAQQSDYNVPEEVKAAGFEICGDELGSIVERHDVEKLKYHGGVSGIAEKLSTSTTKGLSSDPDFLNRRQQVYGINKFTESEAKSFWVFVWEALQDMTLMILGVCAFVSLIVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDASSLTGESEPVMVNSENPFLLSGTKVQDGSCKMLVSTVGMRTEWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFALITFAVLVQGLVSRKLQQGSLWSWNGDDALMMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTIVKTCICMNSKEVSNNKASTLCSELPDSAMKLLLQSIFNNTGGEVVVNQDGKHEILGTPTETAILEFGLSLGGDFQGERQACKLVKVEPFNSTKKKMSVVVELPGGGLRAHCKGASEIILASCDKVLNSDGEVVPLDEGSSNHLKATINQFANEALRTLCLAYMELENGFAAEDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKSEEELLQLIPKIQVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACMTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKGNFISSVMWRNILGQSVYQFMVIWFLQSNGISVFSLSGPDTDLVLNTLIFNSFVFCQVFNEINSREMEEVDVFKGILNNYVFVGVIGATVVFQIIIIEYLGTFANTTPLTLIQWFFSLFVGFLGMPIAAALKKIPV* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0799 962 Gene3D - 450 724 IPR023214 -
Dod02g0799 962 SMART Cation_ATPase_N_a_2 116 190 IPR004014 -
Dod02g0799 962 Pfam haloacid dehalogenase-like hydrolase 650 741 - -
Dod02g0799 962 Gene3D - 725 961 - -
Dod02g0799 962 SUPERFAMILY HAD-like 441 745 IPR036412 -
Dod02g0799 962 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Dod02g0799 962 Pfam Cation transport ATPase (P-type) 514 592 - -
Dod02g0799 962 PANTHER CATION TRANSPORTING ATPASE 3 727 - -
Dod02g0799 962 Gene3D - 141 336 - -
Dod02g0799 962 PANTHER CATION TRANSPORTING ATPASE 727 961 - -
Dod02g0799 962 Pfam Cation transporting ATPase, C-terminus 786 960 IPR006068 -
Dod02g0799 962 PRINTS Sodium/potassium-transporting ATPase signature 576 594 - -
Dod02g0799 962 PRINTS Sodium/potassium-transporting ATPase signature 446 467 - -
Dod02g0799 962 PRINTS Sodium/potassium-transporting ATPase signature 203 223 - -
Dod02g0799 962 PANTHER CALCIUM-TRANSPORTING ATPASE 3 727 - -
Dod02g0799 962 Gene3D - 463 658 IPR023299 GO:0000166
Dod02g0799 962 PANTHER CALCIUM-TRANSPORTING ATPASE 727 961 - -
Dod02g0799 962 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Dod02g0799 962 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Dod02g0799 962 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Dod02g0799 962 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Dod02g0799 962 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 663 IPR023299 GO:0000166
Dod02g0799 962 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Dod02g0799 962 Gene3D - 168 449 - -
Dod02g0799 962 Gene3D - 17 77 - -
Dod02g0799 962 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 961 IPR023298 -
Dod02g0799 962 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 205 478 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g0799 962 Pfam E1-E2 ATPase 237 431 - -
Dod02g0799 962 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Dod02g0799 962 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Dod02g0799 962 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 714 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0799 Dod-Chr2 10394343 10398867 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0799 1 962 Primary Pumps ATPases AT4G37640 76.575 0.0 1580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0799 K01537 - gmx:547567 1639.78