Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0796 ATGGAGGGTTATTTGAATGAGGATTTTGGGGGAGTGAAGGCGAAGAACTCGTCTAGAGAGGCTCTTCGACGATGGAGGCTGGCATGTGGGTTCGTGAAGAACGAGAAGAGACGATTTCGTTTCACTGCCAATCTCCGCAAGAGAGACGAAGCAGCTGCTATGCGTCTCACCAATAAGGAGACACTGAGGGTTGCAACTTTGGTTTCCAACGCTGCATTTCAATATATCCGAGGCGTGCAACCAAGCGATTACAATGTACCTGAGGAAGTCAAAGCTGCAGGTTTTGAAATCTGTGGTGATGAATTGGGGTCTATTGTTGAACGCCATGATGTAAGGAAGCTAAAATATCATGGTGGGGTTAGTGGTATTGCAGAAAAGCTTTCTACATCAACCAACAATGGGCTTAGCAGTGATCCTGATTTTCTAAAGAGGAGACAGCAGGTATATGGAATAAACAAGTTTACTGAAAGTGAAGCCAAGAGTTTCTGGGCTTTTGTTTGGGAAGCCCTTCAAGACATGACTCTCATGATACTTGGAGTGTGTGCTTTTGTGTCTCTCATAGTTGGCATTGCAACAGAAGGGTGGCCCAATGGGGCACATGATGGTCTTGGGATTATTGCAAGTATTTTACTGGTTGTCTTTGTGACAGCAACAAGTGATTATCACCAATCATTGCAGTTCAAAGACTTAGACAAGGAGAAGAAGAAGATTTCCATTCAGGTCACAAGAAATGGTTATAGGCAGAAAATGTCAATATATGAATTACTTCCTGGTGATATTGTGCATCTTGCCATTGGTGACCAAGTCCCTGCTGATGGACTGTTCGTTTCTGGATTTTCTGTGTTGATTGATGTGTCAAGTTTAACAGGTGAGAGCGAGCCAGTGATGGTGAATTCTGAAAATCCATTTCTTCTTTCTGGAACAAAGGTCCAAGATGGATCATGCAAGATGTTGGTTAGCACTGTTGGAATGAGGACTGAATGGGGCAAGTTGATGGCAACTTTGAGTGAAGGCGGAGATGATGAAACCCCATTGCAAGTGAAATTGAATGGAGTTGCAACCATTATTGGGAAGATAGGCCTCTTCTTTGCCTTGATTACTAAAGCAGTGCTGGTGCAAGGACTGGTGAGCCGTAAGCTCCAACAAGGAAGGTTATGGAGCTGGAACGGGTATGATGCTTTGAAGATTTTGGAATTCTTTGCTGATGTTGTTACCATTGTTATTAATGCTGTTCCAGAGGGGCTGCCATTGGCTGTGACATTGAGCCTTGCATTTGCCATGAAGAAGATGATGAATGACAAAGCCCTTGTGAGGCATTGGGCAGCATGTGAGACCATGGGATCAGCCACAACTATATGCAGTGACAAGACTGGAACACTAACAACAAACCATATGACTGTTGTGAAAACATGCATTTGTCTGAATAGCAAGGAAGTGAGCAATAATAAGGCTTCTACTTTGTGTTCTGAACTTCCAGATCCTGCTATGAAACTGCTCCTACAGTCCATATTCAACAACACAGGAGGAGAGGTTGTTGTTAACCAAGATGGAAAACACGAGATTCTAGGGACCCCAACTGAGACTGCAATATTGGAGTTTGGCTTGTCACTTGGTGGCGATTTTCAAGGGGAGAGACAAGCATGCAAGCTTGTTAAAGTTGAGCCATTCAACTCTACTAAAAAGAAAATGAGTGTTGTGGTGGAGCTCCCTAGTGGAGGATTACGCACACACTGCAAAGGTGCTTCTGAGATAATTCTGGCCTCTTGTGACAAGGTGCTGAACTCAGATGGTGAGGTTGTCCCTCTTGATGAAGGATCAAGTAACCATCTTAAAGCCACAATAAACCAGTTTGCTAATGAGGCACTCAGAACTCTATGCCTTGCCTATATGGAATTGGAAAATGGATTCGCTGCTGAGGACCCAATTCCTGTTTCTGGTTATACTTGTATAGGGATTGTTGGTATCAAAGATCCTGTTCGTCCCGGTGTTAAGGAATCTGTAGCAGTATTTCGTTCTGCTGGGATAACAGTAAGGATGGTTACAGGAGATAACATTAATACTGCAAAGGCTATAGCTAGGGAATGTGGAATTTTAACAGATGATGGAATAGCCATTGAAGGCCCTGAATTTAGAGAGAAGAACAAACATAGATTGGTGAAACACCTGCGTACCACATTTGGGGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCCCCAGCTCTTCACGAAGCTGATATTGGACTTGCAATGGGCATTGCCGGAACTGAGGTTGCAAAAGAAAGTGCAGATGTCATAATTCTGGATGATAACTTCTCCACAATAGTGACAGTGGCCAGATGGGGACGTTCAGTTTACATAGATATTCAAAAATTTGTACAGTTCCAGCTAACTATTAATGTGGTTGTATTGATAGTGGAGTTAGCATCAGCCTGCTTGACAGGAAGTGTGCCCCTCACAGCTGTTCAACTTTTGTGGGTTAACATGATAATGGACACACTAGGAGCACTAGCACTTGCAACTGATCCTCTGAATGATGATTTGATGAAGCGTTCACCTGTGGGAAGGAAGGGGAATTTCATCAGCAATGTCATGTGGAGGAACATCTTGGGACAATCAGTGTATCAGTTCATGGTCATATGGTTCCTTCAGTCAAATGGAAAGTCGGTATTTTCCCTTAGTGGCCCCAACACAGATCTGGTCTTGAACACACTTATTTTCAACTCATTTGTCTTCTGTCAGGTTTTCAATGAGATAAACTCACGTGAGATGGAGGAAGTAGATGTCTTCAAAGGCATATTGAATAACTATGTATTCGTGGGTGTCATCGGTGCTACTGTTGTGTTTCAAATCATAATAGTTGAATTCCTGGGAACTTTTGCAAACACAACACCTCTCACTCTGGTGCAGTGGTTCTTCAGCTTGTTTGTTGGATTTTTGGGCATGCCAATTGCAGCTGCCTTAAAGAAGATCCCTGTCTGA 2985 0.4325 MEGYLNEDFGGVKAKNSSREALRRWRLACGFVKNEKRRFRFTANLRKRDEAAAMRLTNKETLRVATLVSNAAFQYIRGVQPSDYNVPEEVKAAGFEICGDELGSIVERHDVRKLKYHGGVSGIAEKLSTSTNNGLSSDPDFLKRRQQVYGINKFTESEAKSFWAFVWEALQDMTLMILGVCAFVSLIVGIATEGWPNGAHDGLGIIASILLVVFVTATSDYHQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDVSSLTGESEPVMVNSENPFLLSGTKVQDGSCKMLVSTVGMRTEWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFALITKAVLVQGLVSRKLQQGRLWSWNGYDALKILEFFADVVTIVINAVPEGLPLAVTLSLAFAMKKMMNDKALVRHWAACETMGSATTICSDKTGTLTTNHMTVVKTCICLNSKEVSNNKASTLCSELPDPAMKLLLQSIFNNTGGEVVVNQDGKHEILGTPTETAILEFGLSLGGDFQGERQACKLVKVEPFNSTKKKMSVVVELPSGGLRTHCKGASEIILASCDKVLNSDGEVVPLDEGSSNHLKATINQFANEALRTLCLAYMELENGFAAEDPIPVSGYTCIGIVGIKDPVRPGVKESVAVFRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKNKHRLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVARWGRSVYIDIQKFVQFQLTINVVVLIVELASACLTGSVPLTAVQLLWVNMIMDTLGALALATDPLNDDLMKRSPVGRKGNFISNVMWRNILGQSVYQFMVIWFLQSNGKSVFSLSGPNTDLVLNTLIFNSFVFCQVFNEINSREMEEVDVFKGILNNYVFVGVIGATVVFQIIIVEFLGTFANTTPLTLVQWFFSLFVGFLGMPIAAALKKIPV* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0796 994 PANTHER CATION TRANSPORTING ATPASE 3 993 - -
Dod02g0796 994 Gene3D - 17 77 - -
Dod02g0796 994 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Dod02g0796 994 Gene3D - 168 987 - -
Dod02g0796 994 SFLD p-type atpase 435 785 IPR044492 -
Dod02g0796 994 SMART Cation_ATPase_N_a_2 116 190 IPR004014 -
Dod02g0796 994 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Dod02g0796 994 Pfam E1-E2 ATPase 237 431 - -
Dod02g0796 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 609 821 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g0796 994 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 205 477 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g0796 994 Pfam Cation transport ATPase (P-type) 514 592 - -
Dod02g0796 994 Gene3D - 140 336 - -
Dod02g0796 994 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 111 994 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dod02g0796 994 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Dod02g0796 994 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g0796 994 PRINTS H+-transporting ATPase (proton pump) signature 765 790 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g0796 994 PRINTS H+-transporting ATPase (proton pump) signature 733 749 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod02g0796 994 Gene3D - 463 658 IPR023299 GO:0000166
Dod02g0796 994 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 993 IPR023298 -
Dod02g0796 994 Gene3D - 450 778 IPR023214 -
Dod02g0796 994 PRINTS P-type cation-transporting ATPase superfamily signature 757 769 - -
Dod02g0796 994 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Dod02g0796 994 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Dod02g0796 994 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Dod02g0796 994 PRINTS P-type cation-transporting ATPase superfamily signature 733 752 - -
Dod02g0796 994 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Dod02g0796 994 SUPERFAMILY HAD-like 451 838 IPR036412 -
Dod02g0796 994 Pfam Cation transporting ATPase, C-terminus 818 992 IPR006068 -
Dod02g0796 994 SFLD Haloacid Dehalogenase 435 785 - -
Dod02g0796 994 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 663 IPR023299 GO:0000166
Dod02g0796 994 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Dod02g0796 994 CDD P-type_ATPase_Ca_PMCA-like 142 866 - -
Dod02g0796 994 Pfam haloacid dehalogenase-like hydrolase 650 747 - -
Dod02g0796 994 PANTHER CALCIUM-TRANSPORTING ATPASE 3 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0796 Dod-Chr2 10377984 10382980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0796 1 994 Primary Pumps ATPases AT4G37640 77.854 0.0 1618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0796 K01537 - gmx:100792691 1696.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0796 02 10377984 10382980 Dod02g0796 02 10377984 10382980 ECH
Dod02g0796 02 10377984 10382980 Dod05g1175 05 33207749 33212856 PCT