Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0782 ATGAGTTGCAACGGGTGCCGTGTCCTTCGGAAGGGTTGCAGCGAGACCTGTATTTTAAGGCCTTGTCTTCAGTGGATCGAGACCCCCGAGGCTCAAGGCCATGCCACTGTCTTCGTGGCCAAATTCTTCGGCCGTGCTGGCCTCATGTCCTTCATTTCCAACGTCCCTGAACCCCAACGACCCGCTTTGTTTCAGTCTCTATTGTTCGAAGCGTGTGGGCGAACCGTTAACCCCGTTAACGGCGCCGTTGGGCTTCTTTGGACCGGAAACTGGCACGTGTGCCAGGCCGCCGTCGAGACGGTGCTCCGCGGCGGAACCCTAAGGCCCATGCCGGAGCTCCTCGGCCTCGACGCGCCCGCTCCCGCCGCCGCCGACGATGCGTCGGATGGTGAAGTCACGTGCACCACCGACATGTGGAGCCTCCGAGATCCGAACCCGAACATCCGATTCACAAGCTCGCGGTCCAATAAGGGCTCTTCTGGCGGGAAGCGCAAGCGATCCGATGAGTCGGTGACCACCGATCTTAACCTCCGGCTGACGCCGAGTCACGTGCAGAGCGGCTGCCGGCGAGAGATTCGCCGGGCGGGGACGCCGTCGATGAATTCGGAGGAGTCCGTGACGACAACGGCGTGCGGCGTTGGAGACCCATACGGTCACGGCGGAGACCGGAAGGTCCTCAACCTTTTCGTCTGA 693 0.6205 MSCNGCRVLRKGCSETCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELLGLDAPAPAAADDASDGEVTCTTDMWSLRDPNPNIRFTSSRSNKGSSGGKRKRSDESVTTDLNLRLTPSHVQSGCRREIRRAGTPSMNSEESVTTTACGVGDPYGHGGDRKVLNLFV* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0782 230 MobiDBLite consensus disorder prediction 142 175 - -
Dod02g0782 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 230 - -
Dod02g0782 230 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Dod02g0782 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 230 - -
Dod02g0782 230 MobiDBLite consensus disorder prediction 142 158 - -
Dod02g0782 230 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0782 Dod-Chr2 10160588 10161375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0782 1 230 AS2 family AT5G67420 57.200 1.13e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod02g0782 LOB 8.5e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0782 02 10160588 10161375 Dod05g1165 05 32803226 32804990 ECH
Dod08g2014 08 47363931 47366028 Dod02g0782 02 10160588 10161375 ECH
Dod02g0782 02 10160588 10161375 Dod02g0782 02 10160588 10161375 ECH
Dod02g0782 02 10160588 10161375 Dod06g0488 06 5958437 5959778 PCT
Dod05g1165 05 32803226 32804990 Dod02g0782 02 10160588 10161375 PCT