Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0781 ATGACGCAATTCACCCGAACAATACCACCTATGCACCACGAAACCACACACCTCTTCTCCAACCCTAGCGTCGTCATGAACAAGAACCAAATCCCTAGGACTAGGCCCTGGCCTGGGTTCCCTACAACACCTAAGTCCCTTGGTAGCACCTTCGGTGACGCCACTTGCATGGAACAGTTACTTGTCCACTGCGCAAACGCCATCGAAACCAACGACGTAACGCTCGCACAACAAATCCTCTGGGTCCTCAACAATATAGCTCCTCCAGACGGCGACTCCAACCAGCGCCTCGCCGGAAGCTTCCTTAGGGCCCTAACCGCCCGCGCCGCAAAATCCGGAAGCTGCAAGTTGCTCGCGGCCGTTGCAACCGCTCACCATAACAACCTCGCCACAGTCGAGACGCACAAGCTCTCTGTCATCGAATTGGCGAACTTCGTTGACCTGACACCCTGGCACCGGTTCGGTTTCGCCGCAGCCAACGCCGCGATTCTAGAAGCTACCGAAGGGTTCTCCGTCATCCACATCGTGGACTTGAGCCTGACGCACTGCATGCAGATACCGACATTGATAGATGCCATCGCGAGCCGCCACGTGGTGCCACCTGTCATCAAGCTCACTGTGCCCGGTGCTGCCTCCAGGGACGGCATCAATATCCCTCCCATGCTCGACCTTTCCTACGAGGAATTGGGCGCCAAGTTGGTCAATTTCGCAAGGTCCAAGAACGTCGTCATGGAATTCAGGGTCGTTTCTTCAAGTTACGAGGACGGTTTCGCGGCTTTGATCGAACACTTGCGGGTGCAACATATAGTTCACGCAGCGGAAGGTCGACCAAGTGAAGCTTTGGTTGTGAACTGTCACATGATGCTTCATTACATTCCCGACGAAACTGCAGTGTCTCCGGAAGCAGATTCGAACCCTTATGTCGTTTATCATGATTATAATTCTTCTTGTTCCACGAGTACTAGTGATTCCTCCTTGCGATCAATGTTTCTTAAGGCACTGCGGAGCTTGGACCCTACGATTGTCGTTTTGGTTGATGAGGATGCGGATTTGACGTCTAATAACTTGGTTTGTAGGCTAAGGTCTGCGTTTAATTATCTGTGGATACCGTACGACACGGTGGACACGTTCCTTCCGCGAGGGAGCAAGCAGAGGCAGTGGTACGAAGCTGATATTTGTTGGAAGATTGAGAATGTGATAGCGCATGAGGGGCTTCAGAGGGTTGAGCGGGTTGAGCCCAAGAGCAAGTGGGAGCAGCGGATGAGGAATGCGAGCTTTCATGGGATCGGTTTCAGCGAGGACTCGGTTTCGGAAGTTAAGGCCATGCTGGATGAGCATGCTGCTGGGTGGGGATTGAAGAAAGAAGATGAGCATCTTGTGCTCACGTGGAAAGGCCACAACGTCATCTTTGCCTCTGCTTGGTTGCCAGCTTGA 1434 0.53 MTQFTRTIPPMHHETTHLFSNPSVVMNKNQIPRTRPWPGFPTTPKSLGSTFGDATCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLAGSFLRALTARAAKSGSCKLLAAVATAHHNNLATVETHKLSVIELANFVDLTPWHRFGFAAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHVVPPVIKLTVPGAASRDGINIPPMLDLSYEELGAKLVNFARSKNVVMEFRVVSSSYEDGFAALIEHLRVQHIVHAAEGRPSEALVVNCHMMLHYIPDETAVSPEADSNPYVVYHDYNSSCSTSTSDSSLRSMFLKALRSLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERVEPKSKWEQRMRNASFHGIGFSEDSVSEVKAMLDEHAAGWGLKKEDEHLVLTWKGHNVIFASAWLPA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0781 477 PANTHER SCARECROW-LIKE PROTEIN 32 27 475 - -
Dod02g0781 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 27 475 IPR005202 -
Dod02g0781 477 Pfam GRAS domain family 57 474 IPR005202 -
Dod02g0781 477 ProSiteProfiles GRAS family profile. 48 475 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0781 Dod-Chr2 10140234 10142643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0781 40 476 GRAS Transcription Factor Family AT3G49950 57.045 8.08e-171 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod02g0781 GRAS 2e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0781 - - adu:107487668 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0781 02 10140234 10142643 Dod02g0781 02 10140234 10142643 ECH