Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0743 ATGGAGCAAGCATATGCTGACTCATCATCTCAGGCTACTCCTTCAGCTTCCAACAGTGAGCCTAACCCCACCAAAGTCTCTGTAGAAACCAGCACTGCACAAGACTCACCGTCATTGTTCCCTGCTTCTGGAATATCATCCTGGGCAAGAAACCTGAAACTTCCACAGTCCCTTGGGCTTGGAGCACCGCAACAGCAGAACTCGCAGGCTGAAAATAATGGGGTGTCGGCTTTTGCTCGCCTGACCAGTGGGCTTGGATTGCGAATGCCCTCCTCGAATGAGGCTGCTCCGGCTCCTACCGAGCAGCCTAATTTGATTGAATCATTCACCAAAGGGTTGATGGACTCTTCCAAGAGTGCAGTAAAGGCAGTGCAGGTCAAAGCACGCCATATGGTCTCTCAAAATAAGCGAAGATACCAGGAAGACGGGTTTGATTTGGATATGGCATACATCACTGAAAATATAGTTGCTATGGGATTTCCAGGCGGTGACCTTAGCTCTGGAATTTTCGGATACATTGAGGGATTCTATCGTAATCATATGGAAGAAGTGATCAGGTTTTTTGAGACTCACCATAAGGGAAAGTACAAAGTATACAATCTTTGTGCAGAGAGGTTATATGATGGAGCACTATTCCAGGGGAAGGTTGCAAGTTTCCCATTTGTTGATCATAATTGCCCTCCTATGCAACTTATAGCATCATTTTGTCAAAGTGCGCATTCATGGTTGAAGGAGGATATTCAAAATGTGGTAGTTGTTCATTGTAAAGCAGGTATGGGGAGGACAGGACTGATGATATGTAGTCTTCTTTTATTTCTTAAGTTCTTCCCAAATGCAGAGGAAGCTATTGATTACTTTAACCAGAAAAGATGTATAGATGGAAAGGGCTTAGTTCTCCCGAGTCAAATCAGATATATCAAATACTTTGAACGGACTTTAACACAATTCAATGGAGAAGTCCACCCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCACAAATGCCCCTATTGGATTAGGCCATCAATTACAATATCTGGTCATAGTGGAATTCTTTTCAGCACAAGAAACCATCCAAAAACAAAGGATCTAATGCCCGAAGATTTCTGGATCAGTGCACCAAAGAAAGGAATAATAGTTTTTGCACTACCGGGGGAGCCTGGTTTGACAGAGTTGGTTGGGGACTTCAAAATTCATTTTCACGATCGACAGGGAGATTTCTACTGTTGGTTGAATACAACAATGATGGAAAATCGACAAATTTTAGATGGCTCAGATCTCGATGGTTTTGACAAGAGGAAGATCCCTACTCCAGGCTTCAAGGTCGAGGTTGTGATGGTAGACTATGATGGCACCCCACCAGCGAGGACAAAGGCCAATCCCGCCAGCAAAGGATCTGATGGCAGCACAAACAAGGTCCAAGATGATGCAAGGCTTGCATCTAATTCAAGTAAGAGTAAGGTACCCAAAAATGGAAATGATGATGTATTCTCTGATAGTGATGAAGAGGAGACCCGGGATACACAAAGGAGAAAATCTGCAACTGAATACAAGTTACTGGCTCCTCAAGAATCTCAGGCAACTACGGACCATGTAGGGATGTTGACACATTCAACGAATCAGTTGTCACTCCAGCATGAGGAACGTACACAAAATAATGCTTCTGAAGAACCAACTACAGAACATGCAGGCCCTAACACCACCAAGTTGGACTCTGTAGGAGCAAGCGAAATCAAGGCAATTGCAGCAGATGCTTCAGTTTTTTCTTTTGGAGATGAAGATTTTGAAAGTGATTGA 1800 0.4389 MEQAYADSSSQATPSASNSEPNPTKVSVETSTAQDSPSLFPASGISSWARNLKLPQSLGLGAPQQQNSQAENNGVSAFARLTSGLGLRMPSSNEAAPAPTEQPNLIESFTKGLMDSSKSAVKAVQVKARHMVSQNKRRYQEDGFDLDMAYITENIVAMGFPGGDLSSGIFGYIEGFYRNHMEEVIRFFETHHKGKYKVYNLCAERLYDGALFQGKVASFPFVDHNCPPMQLIASFCQSAHSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLFLKFFPNAEEAIDYFNQKRCIDGKGLVLPSQIRYIKYFERTLTQFNGEVHPGRRCMLRGFRLHKCPYWIRPSITISGHSGILFSTRNHPKTKDLMPEDFWISAPKKGIIVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMMENRQILDGSDLDGFDKRKIPTPGFKVEVVMVDYDGTPPARTKANPASKGSDGSTNKVQDDARLASNSSKSKVPKNGNDDVFSDSDEEETRDTQRRKSATEYKLLAPQESQATTDHVGMLTHSTNQLSLQHEERTQNNASEEPTTEHAGPNTTKLDSVGASEIKAIAADASVFSFGDEDFESD* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0743 599 Gene3D Protein tyrosine phosphatase superfamily 122 319 IPR029021 -
Dod02g0743 599 ProSiteProfiles Phosphatase tensin-type domain profile. 137 316 IPR029023 -
Dod02g0743 599 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 150 315 IPR029021 -
Dod02g0743 599 MobiDBLite consensus disorder prediction 1 42 - -
Dod02g0743 599 Pfam Protein-tyrosine phosphatase 223 275 IPR000242 GO:0004725|GO:0006470
Dod02g0743 599 MobiDBLite consensus disorder prediction 557 573 - -
Dod02g0743 599 CDD PTP_PTEN 147 311 IPR045101 GO:0016791
Dod02g0743 599 ProSiteProfiles C2 tensin-type domain profile. 323 450 IPR014020 -
Dod02g0743 599 ProSitePatterns Tyrosine specific protein phosphatases active site. 253 263 IPR016130 GO:0016311|GO:0016791
Dod02g0743 599 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 11 599 - -
Dod02g0743 599 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 393 447 IPR035892 -
Dod02g0743 599 MobiDBLite consensus disorder prediction 463 494 - -
Dod02g0743 599 SMART PTEN_C2_2 321 449 IPR014020 -
Dod02g0743 599 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 11 599 - -
Dod02g0743 599 MobiDBLite consensus disorder prediction 520 550 - -
Dod02g0743 599 MobiDBLite consensus disorder prediction 453 573 - -
Dod02g0743 599 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 251 290 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0743 Dod-Chr2 9625906 9634932 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0743 8 599 Protein tyrosine phosphatase (PTP) family AT3G19420 59.551 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0743 K01110 - gmx:100801622 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0743 02 9625906 9634932 Dod02g0743 02 9625906 9634932 ECH
Dod02g0743 02 9625906 9634932 Dod06g0080 06 1064264 1070632 PCT