Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0730 ATGGAGGGTGAAGGAGAAAGAGGAACAAGGAAGAGAGGGGTTGCGGTGGAGGGTGGTGGTGGCGGCGGTGGAGAGAGAAGGTACAAAGGAATAAGGATGAGGAAGTGGGGAAAATGGGTCGCTGAGATAAGGGAACCAAACAAGCGTTCAAGGATTTGGCTAGGTTCATATTCAACCCCAGTCGCCGCCGCAAGGGCCTACGACACCGCCGTCTTCTACCTCCGTGGACCCTCCGCCCGCCTCAACTTCCCTGAGCTTCTCCCCAGAGAGCCGCCCTCACTCCTCGGTGGACCATGCGACATGTCCGCCGCCTCCATAAGGAAGAAGGCCACCGAGGTCGGCGCAAGAGTCGATGCGTTAGAGGCAACCCTCCACCACCACCACCCCCATCATGTGGCGGCGCCGCCGCAGGAGCTCATGTCAGGTGGCGGCGGTAACGGTTTTGCGAATCGGGTTGATTTGAACAAGGTGCCCGAACCCGAGAGTCCGGATTGTGAGTGGGACATGAATTAA 513 0.5887 MEGEGERGTRKRGVAVEGGGGGGGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLPREPPSLLGGPCDMSAASIRKKATEVGARVDALEATLHHHHPHHVAAPPQELMSGGGGNGFANRVDLNKVPEPESPDCEWDMN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0730 170 MobiDBLite consensus disorder prediction 1 24 - -
Dod02g0730 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 15 164 - -
Dod02g0730 170 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Dod02g0730 170 MobiDBLite consensus disorder prediction 128 170 - -
Dod02g0730 170 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Dod02g0730 170 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Dod02g0730 170 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Dod02g0730 170 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Dod02g0730 170 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Dod02g0730 170 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Dod02g0730 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 164 - -
Dod02g0730 170 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0730 Dod-Chr2 9485343 9485855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0730 8 168 AP2-EREBP Transcription Factor Family AT5G67190 55.556 2.04e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod02g0730 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0730 K09286 - gmx:100527066 234.958