Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0720 ATGACTGTCAGAGAATTTGGTATATCTGATATCGCTCTAGAGTCGCTGGCTCAATGTTTTTCTAGAAACACTAGTGAAATTAAGGCCAGATATGAAACTCTTAGTAATGAAGACGATGCTGGTGGGGGTTCCAAGAATGGAGAAACTGAAGATATTTCTCAAAATGGAAATTCTTTTCTGGAGAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAATCTTTTTTGCCGACGTTGTCTTGTTTTTGATTGCAGATTACATGGATGTTCCCAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTCTGTGGAATCCTCCTGACCCTGAAAATGCACCCTGTGGCCCCAATTGTTTTCGATTGGCACTTAAGTCAGAAAGATTTGCCAAACCTACCTCTTCTGCCCAGGCTGATGTTGAAGAGAAATGCTTTGGTGGTTCTTCGTCTAGGAAGAAGTCTGCTGCTAAAAGGAGGATAAAAAGCAGCCAGAGTGAGAGTGCTTCATCTAATGCAAAAAATGTATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGCTTCAGCCTCCCACTCAGCACCGCCTAAATCGAAACCTGTGGGGAGAGGTGGAATTGGTAAGAGGAACAGTAAACGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAGCGACAGAAGAAAACAGTTGTTTCTGATTCTGATTCCATTGTTGGAGCTCTTGAACGTTCATCAAATGACATGGTTACTGACCCACCTGCCATGAGCAGTGAAGATAACACGAGGAAAGAAGAGTTTGTGGATGAGAATGTTTGTAAACAAGAATCCACTGACAACAAATCATGGAAAGCTCTAGAAAAAGGGCTTCTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGCTGCTTTATAGCCAGAAATCTCTTAAATGGTTTAAAGACATGTTGGGAGATTTACCAATACATAAATTGTGACGAAGGAAAGATGTCAGGACCTGCTGGGGATGCTGCAAATTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGACGAAGGTCAAGATTTTTACGTAGAAGAGGAAGAGTCCGTCGCTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATAAGGAAAAGGATTACTGAAAGAAAGGATCAGCCCTGCCGGCAGTACAATCCATGTGGTTGCCAATCAGCTTGCGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGCGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCCGATGTTTGTAGGAATTGTTGGGTTAGTTGTGGTGATGGTACACTTGGGATTCCTAGCCAAAGAGGTGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGACGTATCTGGCTGGGGAGCCTTCTTAAAGAATAATGTTGGTAAGCACGAATATCTTGGAGAGTATACTGGAGAATTAATTTCTCATAGGGAAGCAGATAAGCGAGGAAAAATATATGACCGAGAAAATTCATCTTTTCTCTTCAATCTGAATGACCAGTTTGTTCTTGATGCTTACCGGAAGGGAGACAAATTGAAGTTTGCAAACCATGCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGACCACAGAGTAGGCATTTTTGCCAAGGAAAGGATTCTTGCTGGGGAGGAACTGTTTTACGATTATCGATATGAGCCGGATAGAGCTCCTGCATGGGCTAGGAAACCAGAGGCATCTGGATCAAAAAAAGAGGACGGAGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 1932 0.4312 MTVREFGISDIALESLAQCFSRNTSEIKARYETLSNEDDAGGGSKNGETEDISQNGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWNPPDPENAPCGPNCFRLALKSERFAKPTSSAQADVEEKCFGGSSSRKKSAAKRRIKSSQSESASSNAKNVSESSDSENGPGRDAASASHSAPPKSKPVGRGGIGKRNSKRVAERVLVCMQKRQKKTVVSDSDSIVGALERSSNDMVTDPPAMSSEDNTRKEEFVDENVCKQESTDNKSWKALEKGLLEKGMEIFGRNSCFIARNLLNGLKTCWEIYQYINCDEGKMSGPAGDAANSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNNVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHAPDPNCYAKVIMVAGDHRVGIFAKERILAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0720 643 MobiDBLite consensus disorder prediction 245 266 - -
Dod02g0720 643 MobiDBLite consensus disorder prediction 31 54 - -
Dod02g0720 643 Pfam SET domain 505 608 IPR001214 GO:0005515
Dod02g0720 643 SMART set_7 494 615 IPR001214 GO:0005515
Dod02g0720 643 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 251 641 - -
Dod02g0720 643 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 239 - -
Dod02g0720 643 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 643 IPR025778 GO:0031519
Dod02g0720 643 SMART CXC_2 428 465 IPR033467 -
Dod02g0720 643 Gene3D SET domain 394 611 IPR046341 -
Dod02g0720 643 MobiDBLite consensus disorder prediction 617 636 - -
Dod02g0720 643 ProSiteProfiles CXC domain profile. 380 479 IPR026489 -
Dod02g0720 643 SUPERFAMILY SET domain 368 614 IPR046341 -
Dod02g0720 643 MobiDBLite consensus disorder prediction 617 643 - -
Dod02g0720 643 ProSiteProfiles SET domain profile. 494 609 IPR001214 GO:0005515
Dod02g0720 643 MobiDBLite consensus disorder prediction 39 54 - -
Dod02g0720 643 MobiDBLite consensus disorder prediction 159 186 - -
Dod02g0720 643 Pfam CXC domain 432 463 IPR041355 -
Dod02g0720 643 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 251 641 IPR045318 GO:0006338|GO:0018024
Dod02g0720 643 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 1 239 IPR045318 GO:0006338|GO:0018024
Dod02g0720 643 MobiDBLite consensus disorder prediction 138 209 - -
Dod02g0720 643 CDD SET_EZH 494 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0720 Dod-Chr2 9363888 9368757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0720 483 612 C2H2 Transcription Factor Family AT2G23740 26.531 1.21e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod02g0720 SET 4.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0720 - K11430 gmx:100809840 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0720 02 9363888 9368757 Dod02g0720 02 9363888 9368757 ECH