Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0716 ATGGGGGATGATATGTACAATAACTATGACAGGAATCTCTCCTCGTCCTCTTCCTCACAGGACGAAATCTCGCTCTTTCTGCGTCAGATTCTGCTCCGTTCATCATCTTCAGCAGCATCTTCTTCCCAAACAAATAACAACTCCATGCCCTTGGAAAATGCACACCCATCTTCTTCTTCACCGCTTCATGATGGGAAGATCTCAGCCCAGCTTGGTTCCACCTCTGGAGCAACCCCAGGTTTTCTCTCTGCCTTAGGGGCTTATGGTTCCATGAAGGGACATGGAGGTTCTGCTGCAAATGTGTCTTCATCCTCAGTAGGAGTGAGTGAGAACGACACTGATGACTATGATTGTGAGAGTGAGGAGGCCGTTGAAGCGTTGGCAGAAGAAGTTCCAACAAAACCTGTTACTTGTAGGAGCTCATCAAAAAGAAGCAGAGCAGCGGAAGTTCATAATTTGTCTGAAAAGCGAAGACGGAGTAGGATCAATGAAAAAATGAAGGCTTTGCAGAATCTAATCCCAAATTCTAACAAGACTGATAAGGCTTCAATGCTGGATGAAGCTATTGAATACCTTAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAATGGACTGAGTTTGCATCCTATGTGCTTTCCTGAAGGACTGCAGTCTCTACAATTCTCACGGATGAGTATGGAGTTAAGTGAAGAAAACAGGGCTATCCCTTTAAACATGACAGATGCTCTGCCTCTGCACCAAGGGAACCCCTTGCACTATGCACACAATCTTCCTAACAAACCCACCATGCCGAATCAGCCGCCAGTCACTTATCCTTCATATCTTAACAACTCAGAAACTTCTTTTGGGTTGGAATCCCCAATCCTAGCAGATATAAAACCTCTTCAACCAGGAAGATTTTCTGAGGCGTGCAGGGAAGACATATTGCAGCACCAGCAATCAAACGCAATCCATTCAGATACCAACCCATTAGGATGTTCTCAAGCTGTCAAAGAGTTGGAGCCAGGAACCTTGGCTACGGCATCACTTTCCTTTGACATGCAGACAACTGAAGCTAAGGATAACAGCTCCTTGCAAACATGCATTGCCCGAAGAGATCAGTCAGCAGGGATCATAAGAAATAGTTAG 1137 0.4521 MGDDMYNNYDRNLSSSSSSQDEISLFLRQILLRSSSSAASSSQTNNNSMPLENAHPSSSSPLHDGKISAQLGSTSGATPGFLSALGAYGSMKGHGGSAANVSSSSVGVSENDTDDYDCESEEAVEALAEEVPTKPVTCRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCFPEGLQSLQFSRMSMELSEENRAIPLNMTDALPLHQGNPLHYAHNLPNKPTMPNQPPVTYPSYLNNSETSFGLESPILADIKPLQPGRFSEACREDILQHQQSNAIHSDTNPLGCSQAVKELEPGTLATASLSFDMQTTEAKDNSSLQTCIARRDQSAGIIRNS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0716 378 MobiDBLite consensus disorder prediction 132 158 - -
Dod02g0716 378 MobiDBLite consensus disorder prediction 1 20 - -
Dod02g0716 378 Gene3D - 141 205 IPR036638 GO:0046983
Dod02g0716 378 MobiDBLite consensus disorder prediction 93 115 - -
Dod02g0716 378 PANTHER TRANSCRIPTION FACTOR SPATULA 14 325 - -
Dod02g0716 378 MobiDBLite consensus disorder prediction 144 158 - -
Dod02g0716 378 Pfam Helix-loop-helix DNA-binding domain 150 196 IPR011598 GO:0046983
Dod02g0716 378 MobiDBLite consensus disorder prediction 96 111 - -
Dod02g0716 378 MobiDBLite consensus disorder prediction 37 72 - -
Dod02g0716 378 SMART finulus 152 201 IPR011598 GO:0046983
Dod02g0716 378 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 14 325 IPR031066 -
Dod02g0716 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Dod02g0716 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 206 IPR036638 GO:0046983
Dod02g0716 378 Coils Coil 185 205 - -
Dod02g0716 378 CDD bHLH_AtPIF_like 146 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0716 Dod-Chr2 9305758 9310247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0716 10 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 42.017 1.82e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g0716 HLH 4.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0716 - - gmx:100793754 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0716 02 9305758 9310247 Dod02g0716 02 9305758 9310247 ECH