Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0710 ATGGACTGCGACTGGGTTCGTGGACGCTCGCTTGGCTGTGGAAGCTTTGCCACTGTCAACTTGGCCATTCCCAGCAACGTTTCCGCTCCGCTGCCTTCTCTCTTTGCCGTTAAGTCCTCCAACCTTCACACCTCGTCCTTGCTCAAGAACGAGGAACACGTCCTCAACCGCCTAGGTTCTTCTTGCCCTCAAATCATCAAATGTTTCGGCCACGATTCTACATTCGAAAACGGCGAAGCGTTTTACAACCTCCTCCTCGAATACGCTCCCCGTGGAACCCTCTCCGACCAGCTCAGGAACCAAGGCGGAAGGTTCCCTGAACCCCAGGTTCGACGATACACGAGGTCCATCATCGAAGGCCTAAAACATGTACATGAGAACGGGTTCGTCCACTGCGACATAAAGCTTCAGAACATCCTCGCATTCGGCGACGGCGATGTCAAAATAGCGGACTTTGGGCTTGCAAAGGAGAAAGGGGAGAAACAGGGGAAGAAGAGGTGGGAGTGCAGAGGAACTCCCCTGTTCATGTCGCCGGAAGCAGTGAACGACAACGAGTACGAGTCTCCGGCGGATATATGGGCCCTGGGCTGCGCCGTCGTGGAGATGGCCACCGGAAAACCCGTTTGGAGAGTAGGAAGCGGGTCCAACATGTGGTCGTTGCTGATTCGAATTGGAGTCGGAGAAGAGCTTCCTATGATTCCAGAAGAGTTGTCAGAACAGGGGAAAGATTTTCTGAGAAAGTGTTTCATTAAGGATCCAAGAAAGAGGTGGACCGCGGAGATGCTTCTGAATCACCCTGTTTGTCTCCGGTGA 813 0.5338 MDCDWVRGRSLGCGSFATVNLAIPSNVSAPLPSLFAVKSSNLHTSSLLKNEEHVLNRLGSSCPQIIKCFGHDSTFENGEAFYNLLLEYAPRGTLSDQLRNQGGRFPEPQVRRYTRSIIEGLKHVHENGFVHCDIKLQNILAFGDGDVKIADFGLAKEKGEKQGKKRWECRGTPLFMSPEAVNDNEYESPADIWALGCAVVEMATGKPVWRVGSGSNMWSLLIRIGVGEELPMIPEELSEQGKDFLRKCFIKDPRKRWTAEMLLNHPVCLR* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0710 270 CDD STKc_MAPKKK 4 266 - -
Dod02g0710 270 ProSitePatterns Protein kinases ATP-binding region signature. 11 38 IPR017441 GO:0005524
Dod02g0710 270 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 267 - -
Dod02g0710 270 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 4 267 - -
Dod02g0710 270 SUPERFAMILY Protein kinase-like (PK-like) 4 267 IPR011009 -
Dod02g0710 270 SMART serkin_6 5 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0710 270 Gene3D Transferase(Phosphotransferase) domain 1 4 270 - -
Dod02g0710 270 Pfam Protein kinase domain 7 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0710 270 ProSiteProfiles Protein kinase domain profile. 5 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0710 Dod-Chr2 9256713 9258337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0710 4 266 MAP Kinase Kinase Kinase AT5G67080 59.023 3.86e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod02g0710 Pkinase 5.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0710 - - aip:107641670 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0710 02 9256713 9258337 Dod05g1060 05 28382603 28384062 PCT