Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0709 ATGAATCTCCCACACGCCAAAGGAGTCACGCATCGAATCATCAAAACCACACTTCCCTTATGTGTCGCTGCCGTGGGACGCGATTCTTCGTCATGGACTGGGTCCGTGGACGCTCGCTTGGCAGTGGAAGCTTTGCCACCGTCAGCTTGGCCATTCCCAGAAACACTTCCGCTGAATTTCCTTCTCCCGTTGCCGTCAAAGTCGTCCGATGATTTCACCTCGTGTTTGCTCAAGAACGAGGAACAAGTCCTCCACCGCCTAGGTTCTTCTTGCCCTCGAATCATCAAATGTTTCGGCCACGATTCTACATTCGAAAACGGCGAATTGTTTTACAACATCTTCCTCGAATACGCTCCCGGCGGAACCCTCTCCGACCAGCTCAAGAACCAAGGTGGAAGGTTTCATGAACCCCAAGTTCGACAATACACGAGGTCCATCATCGAAGGCCTAAAACATGTTCACGAAAACGGCTTCGTCCACTGCGACGTAAAGCTTCAGAACATCCTCGTATTCGAAAACGGCGACATTAAACTAGCGGACTTCGGGCTCGCAAAGGAGAAAGGTGAGAAACAGGGGAAGAAGAAGCGGGAGTGCAGGGGAACTCCCCTGTTCATGTCGCCGGAATCAGTGAACGACAACGAGTACGAGTCTCCGGCGGATATATGGGCCCTGGGCTGTGCAGTCGTGGAGATGGCCACCGGAAAACCAGCGTGGAAAGTGGGAAGCGGGTCCAACATGTGGTCGCTGCTGATTCGAATTGGTGTCGGAGAAGAGCTTCCTATGATTCCAGAGGAGTTGTCGGAACAGGGGAAAGATTTTCTGAGAAAGTGTTTCGTTAAGGATCCAACAAAGAGGTGGACCGCGGAGATGCTTCTGAATCATCCGTTTGTTTCCGGTGACGACGTCGTTTTGGTGAAGGAAGTGAGTAACAAGTTGGTGCCTTCGCCGTCGCCGAGAACAAACTTCGATTTCCCTGATTGGGCTTCCACCGTAACGGCTTCTTCATCTTCCGGTTCCACCGTTTCGTCGTGCTTGCCTAGTTTCTGTTCGCCGGAGGATAGGCTCCGGGGGCTTGCCACCGATCAGGGGCCGCCGGATTGGTCAGAATTGGGCGGTTGGACTAGAGTTAGGTGA 1134 0.5291 MNLPHAKGVTHRIIKTTLPLCVAAVGRDSSSWTGSVDARLAVEALPPSAWPFPETLPLNFLLPLPSKSSDDFTSCLLKNEEQVLHRLGSSCPRIIKCFGHDSTFENGELFYNIFLEYAPGGTLSDQLKNQGGRFHEPQVRQYTRSIIEGLKHVHENGFVHCDVKLQNILVFENGDIKLADFGLAKEKGEKQGKKKRECRGTPLFMSPESVNDNEYESPADIWALGCAVVEMATGKPAWKVGSGSNMWSLLIRIGVGEELPMIPEELSEQGKDFLRKCFVKDPTKRWTAEMLLNHPFVSGDDVVLVKEVSNKLVPSPSPRTNFDFPDWASTVTASSSSGSTVSSCLPSFCSPEDRLRGLATDQGPPDWSELGGWTRVR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0709 377 CDD STKc_MAPKKK 77 297 - -
Dod02g0709 377 SUPERFAMILY Protein kinase-like (PK-like) 76 343 IPR011009 -
Dod02g0709 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Dod02g0709 377 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 66 344 - -
Dod02g0709 377 MobiDBLite consensus disorder prediction 356 377 - -
Dod02g0709 377 ProSiteProfiles Protein kinase domain profile. 1 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0709 377 Pfam Protein kinase domain 77 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0709 377 SMART serkin_6 14 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0709 377 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 66 344 - -
Dod02g0709 377 Gene3D Transferase(Phosphotransferase) domain 1 64 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0709 Dod-Chr2 9253029 9254307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0709 64 377 MAP Kinase Kinase Kinase AT5G67080 53.870 4.06e-111 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod02g0709 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0709 - - aip:107641670 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0709 02 9253029 9254307 Dod02g0709 02 9253029 9254307 ECH