Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0706 ATGGACGTGGACATATTGAAAACTTCTTCTGCTAGTGACAGCAGCATAGACATGATGGCAATGATGATGCAAATGGAAAAGTTCCCTGAATTATTATGTGAGCCTTTTTATAACACCACCCTCACCTACCAAGAAAACGAGTTCTCTGGTGGAACATCCACCACCACCACTCTCCCCATATTCCCCAACATTAACCCAAATATAGCAGCTTCACCAAATATAATTAGCCCAACACCACCCTCACCTCCTTCTTCTTCCAATTTCCTTCATCACAATCCTTACCAACAATCAATGACTCCACCACCCATTCATGAGGTTTCGTCAGGGAGGCTCAGGGCTCACAACAACAACGCTTCATTTCCCTACCCTTCTTCTTTTTCTTCATCGGATAATGATAAGAAGAATTCAATGGCTGCAATGAGGGAGATGATTTTCCGTGTAGCGGTTATGCAGCCTATTCACATAGACCCAGAATCCATCAAGCCACCAAAGAGGAGGAACGTGAAGATCTCCAAGGACCCGCAGAGCGTGGCGGCGAGGCACAGGAGGGAAAGGATAAGCGAGAGAATAAGGATTCTGCAGAGATTGGTCCCTGGTGGGACCAAGATGGACACTGCTTCTATGTTGGATGAGGCCATACACTACGTGAAGTTCTTGAAGAAACAAGTGCAGACACTGGAGCAAGCAGGGGCAACAAGTAGACCCATGAATAATGGTACTGTTGTTGGCTTCACGGGGTTTCAAAGTGCCAATGTGAATTATTCTGCTTTTCTGAAGGGTTGCCACCAACCTCATCCTATGGTTGGTTCTTCCGCTTCTAAGCAATTGCTTAGCTAA 837 0.4588 MDVDILKTSSASDSSIDMMAMMMQMEKFPELLCEPFYNTTLTYQENEFSGGTSTTTTLPIFPNINPNIAASPNIISPTPPSPPSSSNFLHHNPYQQSMTPPPIHEVSSGRLRAHNNNASFPYPSSFSSSDNDKKNSMAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATSRPMNNGTVVGFTGFQSANVNYSAFLKGCHQPHPMVGSSASKQLLS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0706 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Dod02g0706 278 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 265 IPR045843 GO:0003700|GO:0006355
Dod02g0706 278 Gene3D - 169 239 IPR036638 GO:0046983
Dod02g0706 278 PANTHER TRANSCRIPTION FACTOR HEC2 1 265 - -
Dod02g0706 278 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 174 232 IPR036638 GO:0046983
Dod02g0706 278 MobiDBLite consensus disorder prediction 114 133 - -
Dod02g0706 278 Coils Coil 209 229 - -
Dod02g0706 278 CDD bHLH_AtIND_like 171 227 - -
Dod02g0706 278 Pfam Helix-loop-helix DNA-binding domain 180 219 IPR011598 GO:0046983
Dod02g0706 278 SMART finulus 176 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0706 Dod-Chr2 9209477 9210747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0706 13 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 49.583 2.23e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g0706 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0706 - - gmx:100796649 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0706 02 9209477 9210747 Dod02g0706 02 9209477 9210747 ECH