Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0697 ATGTCTCAACGGTCGGTGCCGGCGCCGTTCTTGTCGAAGACATATCAGCTGGTGGATGATCCTGCGACGGACGAGGTGATATCATGGGGTGAGAGTGGCAACACTTTTGTTGTTTGGAAACATGCGGATTTTGCCAAGGATTTACTCCCCAATTATTTTAAGCATAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGATTTCGAAAGATCGTGCCAGACAAATGGGAATTCGCCAACGAACATTTCAAGCGAGGGCAAAAGGAGCTTCTCGCCGAGATCAAACGCCGCAAGACCGTATCCCAGTCACCGGCGCCGCCGGTCCCAGAGCCCGGAAAATCCGCCGCCGACGGAAACTCTCCATTGAACTCCAGCGGCGACGACTCCACCTCCACCTCATCCCCCGATTCGAAGAACCCGGGATCGGTGGAGACGACAACCCCTCATCAGGTCGCGAATTTATCGAGCGAGAACGAGAAATTGAAGAGGGACAACGAGACGCTGAGCTGGGACCTGGCACGTGCGAAGAAGCAGTGCGATGAGTTGGTGGCTTTCCTGAGGGATCGCCTCAACGTGTGTCCCGATCAGATCGACCGCATCATGCGGCAAGGAAGTTGCGGGTCCACCCGTGGTCCGGTGCAATCTGATAACACAGTAGTTGATGACGACGATAAAGGGTTAGTAGGTGAGGGCGGTGGAACAGACAGTTTGAAACTGTTTGGTGTTTGGTTGAAAGGTGAGAAGGATAACGGCCGCAAGAGAGGGCGTGAAGGCCCAATGGGCTTCGGTGGGCCTCCTGCTAAGGATTTGAAGACTAGTACTGGTACTACTGCTGCAGTGGTTGTTGACTTTGGTGGTTCCAATGTTAATGTGATGATGAAGAGCAGCAAGGTCTGCAGCTGA 909 0.5347 MSQRSVPAPFLSKTYQLVDDPATDEVISWGESGNTFVVWKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEHFKRGQKELLAEIKRRKTVSQSPAPPVPEPGKSAADGNSPLNSSGDDSTSTSSPDSKNPGSVETTTPHQVANLSSENEKLKRDNETLSWDLARAKKQCDELVAFLRDRLNVCPDQIDRIMRQGSCGSTRGPVQSDNTVVDDDDKGLVGEGGGTDSLKLFGVWLKGEKDNGRKRGREGPMGFGGPPAKDLKTSTGTTAAVVVDFGGSNVNVMMKSSKVCS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0697 302 MobiDBLite consensus disorder prediction 250 274 - -
Dod02g0697 302 Coils Coil 153 180 - -
Dod02g0697 302 MobiDBLite consensus disorder prediction 98 165 - -
Dod02g0697 302 MobiDBLite consensus disorder prediction 119 157 - -
Dod02g0697 302 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0697 302 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0697 302 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0697 302 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0697 302 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 274 IPR027725 -
Dod02g0697 302 Gene3D - 2 101 IPR036388 -
Dod02g0697 302 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Dod02g0697 302 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0697 302 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0697 302 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-1 2 274 - -
Dod02g0697 302 MobiDBLite consensus disorder prediction 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0697 Dod-Chr2 9103064 9106868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0697 2 302 HSF AT4G36990 53.247 2.71e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod02g0697 HSF_DNA-bind 6.7e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0697 K09419 - gmx:100791543 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0697 02 9103064 9106868 Dod02g0697 02 9103064 9106868 ECH
Dod02g0697 02 9103064 9106868 Dod05g1051 05 27680702 27685737 PCT