Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0674 ATGCGTTGGTTGCCAGCCCTTATTTTCTCTTCTTCTTCTTCCGGTGATCGCACCCTCAAGACCTCTGCTTCGTCTTCCGCTCTCGCGGACTACCACCACGGGAAGAAGAAGCTGGAAAGCGCGCGCACACGCGGCGTGTGGCTGTTCGGGATCGGCAAGAAGTCCACGCGCTCCAGGAGGCAGCGCCACGTGGGCGATCACGATGAATCCGACGATGGTGGCGCCGTCGTTGTGCCGTCGTCTAGTCCGCCCAGCACCTCCGACCGGAGCTACATCCGGTCGTATACTTCGTGCCCCTCCACCGCCTCTGTTGCGCCTCTGCCGTTGCCCTTGCCGGAGCTGACCTCAGCCGCCGGGACACGGCAGAGAGACGATGACTGCCCTTTGCCCTCGCCCAAGGACGCTGCCCCTACCGGCTTTCGCATGCGAAGTGTTTTTGCTAGCCAAAGAGGGAACTCGGAGTCGGGAGAAACAAGGACACGAGGGATGGCCCCTCAAGGCACAAGAAGCTCTAGGAGTAGCCCAGGTAGTCCTTTTGAAAGTCCCACACTCAGTCCCCAGAAAAGTAAAAACGATGATTTTGTGCCATACCATTACGTGCCACCAAAAGGGAATCAATTCTGGTCTGCACCAGAGATAGCCACTGGTACATATGCAGCAGCAGGGTTGCGACCTCCTGCTCTCTTTGATCTCTCTACATTAGGGGCTGATAATCATATTAAGAATAATAATAATCCTTCTTCTTCTCCCCACCGTAGTCCACCTGTAATAAGTCCCCGCCAGTACTCCAGAAGCCCAACTAGACCTTCTTCACCTATGGCTATTCCCAGGTTATCCCTTGACACCTCAAAAGGGCATCGTGAAGGTACTTCTCCTATCAATGTTCACCCCTTGCCCTTGCCTCCTTGGGCTGGGACAGGCTTGCCTTCACCAACCTCGAACTTTTCCCAAGCTGGGGCTAAGACTGAATCTGTCTCAATGAAATGCCAATGGCAAAAAGGAAAACTTATTGGCCGAGGTACTTTCGGAAGTGTTTATGTTGCCACCAATAGAGAAACCGGGGCATTGTGTGCAATGAAAGAAGTAGAAATGTATGCTGATGATCCAAAATCTGCAGAGTGTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCATCTAAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAGTAGTTGAAGACAAGTTCTATATTTATTTGGAGTATGTCCATCCCGGTTCAATAAATAAATACGTCCGCGAACATTGTGGTGCCATAACAGAATCTGTTGTTCGGAATTTCACTCGCCATATTCTTTCTGGATTGGCTTACTTGCATTGCAAAAAGACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGAGTTGTCAAGCTAGCTGACTTTGGGATGTCCAAGCTTCTAACTGGACAAGCTGCTGATCTTTCTCTGAAGGGAAGTCCATACTGGATGGCTCCCGAGCTTTTGCATGCAGTTATGGAAAAAGATAACAGCTCTGATCTAGCTTTTGCTATTGATATTTGGAGCTTGGGTTGTACAATTATCGAAATGTTCACTGGGAGGCCTCCTTGGAGCGAGTACGAAGGAGCCGCAGCTATGTTTAAGGTTATGAAGGATACCCCTCCCATACCTGAAGCATTGTCATCAGAGGGCAAAGATTTCCTGAGGCTGTGCTTTGGAAGAAACCCAGCAGAGCGGCCAAGTGCTTTAATGTTGCTAGATCATCGATTTCTGAAGAATTGA 1785 0.4936 MRWLPALIFSSSSSGDRTLKTSASSSALADYHHGKKKLESARTRGVWLFGIGKKSTRSRRQRHVGDHDESDDGGAVVVPSSSPPSTSDRSYIRSYTSCPSTASVAPLPLPLPELTSAAGTRQRDDDCPLPSPKDAAPTGFRMRSVFASQRGNSESGETRTRGMAPQGTRSSRSSPGSPFESPTLSPQKSKNDDFVPYHYVPPKGNQFWSAPEIATGTYAAAGLRPPALFDLSTLGADNHIKNNNNPSSSPHRSPPVISPRQYSRSPTRPSSPMAIPRLSLDTSKGHREGTSPINVHPLPLPPWAGTGLPSPTSNFSQAGAKTESVSMKCQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEMYADDPKSAECIKQLEQEIKVLSHLKHPNIVQYYGSEVVEDKFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHCKKTIHRDIKGANLLVDSAGVVKLADFGMSKLLTGQAADLSLKGSPYWMAPELLHAVMEKDNSSDLAFAIDIWSLGCTIIEMFTGRPPWSEYEGAAAMFKVMKDTPPIPEALSSEGKDFLRLCFGRNPAERPSALMLLDHRFLKN* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0674 594 MobiDBLite consensus disorder prediction 57 197 - -
Dod02g0674 594 Gene3D Transferase(Phosphotransferase) domain 1 328 594 - -
Dod02g0674 594 SMART serkin_6 331 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0674 594 Pfam Protein kinase domain 332 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0674 594 MobiDBLite consensus disorder prediction 13 35 - -
Dod02g0674 594 MobiDBLite consensus disorder prediction 239 272 - -
Dod02g0674 594 ProSitePatterns Protein kinases ATP-binding region signature. 337 360 IPR017441 GO:0005524
Dod02g0674 594 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 594 - -
Dod02g0674 594 MobiDBLite consensus disorder prediction 239 318 - -
Dod02g0674 594 ProSiteProfiles Protein kinase domain profile. 331 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0674 594 MobiDBLite consensus disorder prediction 13 28 - -
Dod02g0674 594 MobiDBLite consensus disorder prediction 79 103 - -
Dod02g0674 594 MobiDBLite consensus disorder prediction 145 190 - -
Dod02g0674 594 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 594 - -
Dod02g0674 594 SUPERFAMILY Protein kinase-like (PK-like) 328 593 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0674 Dod-Chr2 8798536 8802802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0674 1 594 MAP Kinase Kinase Kinase AT5G66850 52.351 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod02g0674 Pkinase 6.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0674 - - cam:101502514 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0674 02 8798536 8802802 Dod05g1014 05 25256265 25262442 PCT