LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g0667	ATGGCTGCAGCTGCTATTGGAACGGTTGTGAAAGCGGCATTGGGAGCCTATAACCATGGTCAAGAGTACTTCGACGACCTTGACACCAGCAGGAACACCTTGAAGTCTTTGGCTCTCCTTGCGGACGAGATGATGAGATACAGCGATCAGTTGGAGCAACCAAGCCCTGAGATAGAGAGGTTTCAAGTTCTGCTCCGTGAAGGTGAACAGCTTGTCCAGATATGCCCCAAAACTTGGTGGGAGATACTCACTTTCCGTTACTACAAAGGAAGGCTTCGGGCTAGGGACGATGAGCGGAGAAGGCACTTGTCTGTTAACCTGCAAGCTCAGAATACAGCCAACTTGATGAAGGTTATGCTCGATGTGAAGCACATTCTGGAGATTCTGATGAGCAATTTCGGGCAGCATGATGGGGTTCAGATAAAGGGTATAAGGGGGGCTCCTGAAGAACCAGAGTACTGTATAGGAATGGGTGATCATCTGAGCCGGTTGAGGAGGGAGCTGCTCAAGGATGGAGTGTCTGTCCTTGTGCTGACTGGCTTGGGAGGCTCAGGGAAAAGCACTCTCGCCAAGAAGATCTGTTGGGATCCCCAAGTCAAAGGAAAGTTCGGGGCAAACATCTTCTTTGTCACCTTCTCAAAGATGCCCAACTTGAAGAACATTGTAAAGACCCTATTTGAAAATTGTGGACGTCAGGTGCCTCAGTTTCAAAATGATGAAGATGCAATTAACCGATTGGGAGTACTTCTGAGGCTTGTTGGGGGAAATCCAATATTGTTGGTCCTGGATGATGTTTGCGATAACTCAGAAGCCCTTGTTGAGAAGTTTAAAATCCAGATACCAGATTATAAGATTTTGGTGACTTCAAGGTTTGCATTTCGAAGATTTGGCACCCCACAGAAGTTGGAACCACTTGGTCACAAAGACGCAGTGTCCCTTTTCCGCAAATTTGCTGGACTGGATAGTAGCAGTTCATACATGCCCTACGACAATCTAGTCGACGAGATAGTGAAAGGTTGTAAGGGTTCACCATTGGTGCTGGAAGTCATTGGTGGATCACTCAGGCAGCAGCCTTTTGAGCTGTGGGAAAATATGAAGGAAGGGTTACAATGTCAGTCCATTCTGGAGTCTCTTAGTAATACTGATGACCTGCTTGGTCGCCTCCAACAAAGTTTAGATATATTGAATGATAAGCTCTTAGTCAATGAGAAGGAGTGTTTCATGGATCTAGGCCTATTTCCTGAAGACCAAAGGATCCCTGTTGCTATTCTCATTGATATGTGGGCAGAACTGCATAGCCTTGATGAGAATGGCAGGAATGCAATGATCATCATCCATGCTTTAACCGCCAAGAATTTGGTTAAACTCATAGAGACAAGGAAAGTTGCAGAGGATGAGTACAAGTACTACAATAACCACTTCATCACGTTGCATGATAACCTCAGAGAGCTGGCGGCCCATCAAAGCAACCAGGAACCAATTGAACAGAGAAAAAAACTGCATATTCAGTTATATGATGATAAACGTCCTGAATGGTGGGTAGGGCAGAATCAGCAAGGGACACTTGGCCGCATGTTCTCATTCTTATCCACAATGTTGATAGGACAAAAACAGCAAAGGGTTGCAGCCCAAGTGTTGTCTATATCAACTGATGAAAATTTTGATTCTGATTGGTGTGACATGCAACCTGATGGAGCTGAGGTTCTGATTTTAAATCTTCGCTCTAGCCATTCGAGTCTTGTGATGGGGGAGTTTCTCATTTTATCACAACTATTTCGTCTCACCATCACAACTCCATCAGAACTCCTTCTCAAGCACCGCGGCCACCCCCAAATCCATCGGAGCCAGGCCGCAGAACCACCGGCGTGGGGCGCGAACCAGACCCCAGCCTCCTCCGCAACCCATGTCTCCGACACTCCCTTCGCTGACGACGAGAAGCTCCCTTTTGGGCACAGAGAGAGAGAGCGGTGGAAGGCGGAGGGAGCCAACGCCACCGTGACCTCGGAGCGGCTAGGTCGCTGCACGAATGATGAGGGTCAAGAGTACTTCGACGACCTTGACACCAGCAGGGAGACATTGAAGTCTTTGGCTCCCCTTGCGGATCAGATGGTGAGATACAGCCATCAGTTGGAGCAACCAAGCCCAGAGATAGAGAAGTTTCAAGAGCTGATCCGTGACGGTGAACAGCTTGTCCAGATATGCCCCACAACTTGTTGGGAGATATTCAAGTTCCGTTACTACAAAAGCAGGCTTCGGGCGAGGGACAATGAGCGGAGAAGGTTCTTGTCTGTTAACCTGCAAGCTCAGAATACAGCCAACTTGATGAAGGTTATGGTCGATCTGAAGAGAATTCTGGAGATTCTGGAGAAGAATTTCGGAGGTATAAGGGGGGCTCCTGAAGAACCAGAGTACTGTGTGGGAATGGATGCTCATCTGAGCCAGTTGAGGAGGGAGCTGCTCAAGGATGGAGTATCTGTCCTTGTGCTGACTGGCTTGGGAGGCTCAGGGAAAAGCACTCTCGCCAAGAAGATCTGTTGGGATCTCCAAGTCAAAGAAGACCTTGTTGAGAGTTTTAGATTCCAGATACCAAATTATAAGATTTTGGTGACTTCAAGGTTTGCATTTCGAAGATTTGACACCCTACAGAAGTTGGAACAACTTGGTCACAATGACGCAGTGTCCCTTTTCTGCAAATTTGCTGGATTGGATAGTAGCAGTTCATACATGCACCATCACAATCTAGTCGACGAGATAGTGAAAGGTTGTAAGGGTTCACCATTGGTGCTTAAAGTCATTGGTGGATCACTCAGGCAGAAGCCTTTTGAGCTGTGGGAAAATATGAAGGATGCGTTAAAAAGTCTGTCCATTCTGGAGTCTATTATTAATAATGATGACTTGCTTTGTCACCTCCAACAAAGTTTAAATATATTGAAGGATAAGCTCTTAGTCAATGAGAAGGAGTGTTTCATGGATCTAGGCTTATTTCCTGAAGACCAAAGGATCCCTGTTGCTACCCTCATTGATATGTGGGCAGAACTGCATAGCCCTGATGAGAATGGCAGGAATGCAATGATCATCATCCATGCTTTAGACACCAAGAATTGGGTTAAACTCCTAGACAAGATGAAAATTTTGATTCTGATTGGTGTGACATGCAACCTGATGAAGCTGAGGTTCTGA	3180	0.4648	MAAAAIGTVVKAALGAYNHGQEYFDDLDTSRNTLKSLALLADEMMRYSDQLEQPSPEIERFQVLLREGEQLVQICPKTWWEILTFRYYKGRLRARDDERRRHLSVNLQAQNTANLMKVMLDVKHILEILMSNFGQHDGVQIKGIRGAPEEPEYCIGMGDHLSRLRRELLKDGVSVLVLTGLGGSGKSTLAKKICWDPQVKGKFGANIFFVTFSKMPNLKNIVKTLFENCGRQVPQFQNDEDAINRLGVLLRLVGGNPILLVLDDVCDNSEALVEKFKIQIPDYKILVTSRFAFRRFGTPQKLEPLGHKDAVSLFRKFAGLDSSSSYMPYDNLVDEIVKGCKGSPLVLEVIGGSLRQQPFELWENMKEGLQCQSILESLSNTDDLLGRLQQSLDILNDKLLVNEKECFMDLGLFPEDQRIPVAILIDMWAELHSLDENGRNAMIIIHALTAKNLVKLIETRKVAEDEYKYYNNHFITLHDNLRELAAHQSNQEPIEQRKKLHIQLYDDKRPEWWVGQNQQGTLGRMFSFLSTMLIGQKQQRVAAQVLSISTDENFDSDWCDMQPDGAEVLILNLRSSHSSLVMGEFLILSQLFRLTITTPSELLLKHRGHPQIHRSQAAEPPAWGANQTPASSATHVSDTPFADDEKLPFGHRERERWKAEGANATVTSERLGRCTNDEGQEYFDDLDTSRETLKSLAPLADQMVRYSHQLEQPSPEIEKFQELIRDGEQLVQICPTTCWEIFKFRYYKSRLRARDNERRRFLSVNLQAQNTANLMKVMVDLKRILEILEKNFGGIRGAPEEPEYCVGMDAHLSQLRRELLKDGVSVLVLTGLGGSGKSTLAKKICWDLQVKEDLVESFRFQIPNYKILVTSRFAFRRFDTLQKLEQLGHNDAVSLFCKFAGLDSSSSYMHHHNLVDEIVKGCKGSPLVLKVIGGSLRQKPFELWENMKDALKSLSILESIINNDDLLCHLQQSLNILKDKLLVNEKECFMDLGLFPEDQRIPVATLIDMWAELHSPDENGRNAMIIIHALDTKNWVKLLDKMKILILIGVTCNLMKLRF*	1060

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g0667	1059	PANTHER	PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8	685	1039	IPR039203	GO:0050832
	Dod02g0667	1059	PANTHER	PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8	4	580	IPR039203	GO:0050832
	Dod02g0667	1059	Gene3D	-	886	964	IPR042197	-
	Dod02g0667	1059	Gene3D	-	305	386	IPR042197	-
	Dod02g0667	1059	PRINTS	Disease resistance protein signature	175	190	-	-
	Dod02g0667	1059	PRINTS	Disease resistance protein signature	340	354	-	-
	Dod02g0667	1059	PRINTS	Disease resistance protein signature	252	266	-	-
	Dod02g0667	1059	Pfam	NB-ARC domain	159	375	IPR002182	GO:0043531
	Dod02g0667	1059	Pfam	NB-ARC domain	879	956	IPR002182	GO:0043531
	Dod02g0667	1059	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	146	410	IPR027417	-
	Dod02g0667	1059	MobiDBLite	consensus disorder prediction	621	638	-	-
	Dod02g0667	1059	Pfam	Arabidopsis broad-spectrum mildew resistance protein RPW8	690	783	IPR008808	-
	Dod02g0667	1059	Pfam	Arabidopsis broad-spectrum mildew resistance protein RPW8	4	124	IPR008808	-
	Dod02g0667	1059	Gene3D	-	970	1047	IPR036388	-
	Dod02g0667	1059	Gene3D	-	388	488	IPR036388	-
	Dod02g0667	1059	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	799	992	IPR027417	-
	Dod02g0667	1059	Gene3D	-	140	298	IPR027417	-
	Dod02g0667	1059	Gene3D	-	792	860	IPR027417	-
	Dod02g0667	1059	MobiDBLite	consensus disorder prediction	618	645	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g0667	Dod-Chr2	8662336	8677976	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g0667	180	460	WRKY Transcription Factor Family	AT5G45050	25.753	3.71e-09	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g0667	-		-	gmx:100792590	673.7