Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0656 ATGCCGTCGTCGGACTCCGGAGAAAGCCGTCGAGCATCGAAGCCGCAGAACACTGCAGGAGCTCTGCCGCCGCCGGAGCAAGAGCACTTGCCGTGCCCTCGCTGCGACTCAACCAACACCAAGTTCTGCTACTACAACAACTACAACTTCTCACAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACATCCCAGTCGGCGGCGGCAGCCGCAAGAACGCCAAGCGCTCCCGCACCGTCTCCGCCGCACCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGTGACCTCCGCCTCTTCTGTAACGCCGATGATGATGCCCGTCGCCGCCAACCATGGAGGGCCTATGCAGTTCAACGGTGGAGTTGTTGTTGATGGTGAAGTTAAGGGTAATAATGTCAGTGTGTGTGGTGGGAGTGGGAGTTTTACTTCTTTACTTAGCAACACCCAGGCCGGGCCTGCTGGGTTTCTGGCTCTAGGCGGGTTTGGGCTTGGGCTTGGGCCTGCGCTTGAAGATGTGGAGTTTGGAATGGGGAGAGCAGCAGCGGGTTGGGCTTTCCCGGGAATGGCGGATGGAGGTAACATTGTCGCCGCCGGTGGCGGCAGCGTTGCTGGTTCCGGTGTTGGGAACACGTGGCAGTTTGAAAACGGGGAAGGTGGATTTGTTGGTGGAGAATGCTTCTCTTGGCCTGGGCTAGCGATTTCAACTCCTGGAAATGGTCTGAAATGA 753 0.6029 MPSSDSGESRRASKPQNTAGALPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTVSAAPSSSSSAAAAVTSASSVTPMMMPVAANHGGPMQFNGGVVVDGEVKGNNVSVCGGSGSFTSLLSNTQAGPAGFLALGGFGLGLGPALEDVEFGMGRAAAGWAFPGMADGGNIVAAGGGSVAGSGVGNTWQFENGEGGFVGGECFSWPGLAISTPGNGLK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0656 250 MobiDBLite consensus disorder prediction 83 101 - -
Dod02g0656 250 MobiDBLite consensus disorder prediction 71 101 - -
Dod02g0656 250 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 247 - -
Dod02g0656 250 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Dod02g0656 250 MobiDBLite consensus disorder prediction 1 32 - -
Dod02g0656 250 MobiDBLite consensus disorder prediction 1 16 - -
Dod02g0656 250 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Dod02g0656 250 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 247 IPR045174 GO:0003700|GO:0006355
Dod02g0656 250 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0656 Dod-Chr2 8560668 8562319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0656 1 250 C2C2-Dof Transcription Factor Family AT3G50410 49.618 4.73e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod02g0656 zf-Dof 3.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0656 - - jre:108995274 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0656 02 8560668 8562319 Dod02g0656 02 8560668 8562319 ECH