Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0642 ATGTTTCTTCATCGTTACACAAACTTCGCTATATTGCTCACAATCTTCGTAGCTTACACAACAACAACAACAACAAAGGCACAGAACCTCAGCAACACCATCTGCAACCGCCATTGCGGAGGGAAATCCCTGAAGTACCCTTTTGGGTTCTCCGAAGGTTGCGAAGTGAGACTGAGCTGTGCCAACGACCAAGTCCAAGTTGGCGATTTTCTGGTACAGAACGTAACAACCAGCAGCATATTCATCAACCTCCCCGCCAAATGTAACCGGAGCATCCAATCCATCTTCCCACTGTTCAGTGACAACTTTGCCCCCACGTGGAACAACAGCTTCCTCGTGCAGAACTGCACGGGGGAGCTCGGCGGCTGCGTCATCCCAGCCTCCGCCTTCACGGGCGGCAGACAGGGCGAGGTCGAGAGCTGCGACCGCACGAGCGGCAACATCACTTGTCTCACGCAGAAACAGAACCAGAGCGCTGATGTAGTGGATTCTAACGATTTTATTCGATCTGGGTGCAAGTTCTTGTTCTCTGCGGTTGCTATTGCGCACAGCAAAGAGCTTTCTCTGCAGTTTCAGGTGGTGGAGTTGGGGTGGTGGCTTCAGGGTCGTTGTGACGAATGCTCTTCTTCCAACGCTTCCTGCACAACGGTGAGTCTTCATGGAAACAAGACCGGCTTTCGGTGTCAGTGCGATGATGGTTTCGAGGGAGATGGCTTCGCCAAAGGTGCCGGTTGCCGGAGAGTTTCAAGTTGCAGTGCATCGACACTAACATCTGGGGGATGTGGGACAGCAACCAAAATCGGAGTTATTGTTGGAGTGATCACAGCTGGAGTTTTGGTCGTGGCTGTTCTGTTTCTGGTATGCTATTGTGCCAGGCGCCGTTCTACTTGGTTGAGAAAACATACAAGAGTAAAGCGCCTCTTACGTGAAGCTGCAGGCAACTCCAGTGTACCCTTCTACCCTTACAAAGAAATAGAAAGAGCCACAAATTCTTTCTCTGAGAAGCAAAGGCTGGGAACTGGGGCTTTTGGTACGGTTTATGCTGGAAAGCTTCACAATGATGAGTGGGTTGCTATAAAAAAGATAAGGCATAGAGACACCAACAGTGTTGATCAAGTCATGAATGAGATCAAACTCCTTTCTTCAGTGAGTCACCGGAACCTAGTTCGCCTCTTAGGTTGCTGCATTGAGGAGGGAGAGCAGATCCTTGTTTATGAATATATGCCTAATGGAACACTGTCTCAGCATTTGCAAAGAGAGAGGGGTAGAGGTCTTCCATGGACAATAAGACTTACCATTGCCACTGAAACTGCTAATGCTATTGCATATCTTCATTCCGCAATTCATCCACCAATTTATCACAGAGACATAAAATCCAGTAACATACTCTTGGATTACGGCTTCAAATCTAAAGTCGCTGATTTTGGACTTTCTAGGCTTGGCCTGACAGAAACATCACACATCTCAACTGCCCCACAAGGGACTCCAGGCTATGTTGATCCTCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTGGAGATAATAACTGCCTTGAAAGTGGTTGATTTTGCTCGACCTCAGAGTGAGGTTAATTTGGCTGCCCTTGCTGTTGATAGGATTAGGAGGGGTGCTGTAGATGAGATCATAGATCCCTTCCTTGATCCACATAGAGATGCTTGGACACTGTATTCTGTTCATAAGGTGGCTGAGCTTGCATTTAGGTGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAACGCATCAAACGCAGTGGATGGGCAGCTATGGAGGAAAGTATGTGCCTGGCTTCATCAGTTGGGTCTGGAAATTCTTCTCCTTGCAGAGGAAGTGAGAAGTCACTGAGTAGTTTTAAATTCAAGAGAGCAGGGCAAGGGAGTGAGATATTGATTGTTCCACAAAAGACAGAGGACTTTCTGCAATCTGTAGAGGTGAAGGACAGCTCCCCTGTATCAGTGTATGACCCTTGGCCAAGTGGACAAAGCTCACCTTCAACAAGCAGCTTGTTGGACAATGCAGTTCAGTGA 2103 0.4769 MFLHRYTNFAILLTIFVAYTTTTTTKAQNLSNTICNRHCGGKSLKYPFGFSEGCEVRLSCANDQVQVGDFLVQNVTTSSIFINLPAKCNRSIQSIFPLFSDNFAPTWNNSFLVQNCTGELGGCVIPASAFTGGRQGEVESCDRTSGNITCLTQKQNQSADVVDSNDFIRSGCKFLFSAVAIAHSKELSLQFQVVELGWWLQGRCDECSSSNASCTTVSLHGNKTGFRCQCDDGFEGDGFAKGAGCRRVSSCSASTLTSGGCGTATKIGVIVGVITAGVLVVAVLFLVCYCARRRSTWLRKHTRVKRLLREAAGNSSVPFYPYKEIERATNSFSEKQRLGTGAFGTVYAGKLHNDEWVAIKKIRHRDTNSVDQVMNEIKLLSSVSHRNLVRLLGCCIEEGEQILVYEYMPNGTLSQHLQRERGRGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSSNILLDYGFKSKVADFGLSRLGLTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPQSEVNLAALAVDRIRRGAVDEIIDPFLDPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMMEVAEELERIKRSGWAAMEESMCLASSVGSGNSSPCRGSEKSLSSFKFKRAGQGSEILIVPQKTEDFLQSVEVKDSSPVSVYDPWPSGQSSPSTSSLLDNAVQ* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0642 700 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0642 700 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 679 IPR045274 GO:0007166
Dod02g0642 700 Gene3D Transferase(Phosphotransferase) domain 1 408 622 - -
Dod02g0642 700 Gene3D Phosphorylase Kinase; domain 1 292 407 - -
Dod02g0642 700 SMART serkin_6 332 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0642 700 Pfam Protein tyrosine and serine/threonine kinase 335 604 IPR001245 GO:0004672|GO:0006468
Dod02g0642 700 MobiDBLite consensus disorder prediction 673 700 - -
Dod02g0642 700 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Dod02g0642 700 SUPERFAMILY Protein kinase-like (PK-like) 312 605 IPR011009 -
Dod02g0642 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Dod02g0642 700 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 21 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0642 Dod-Chr2 8434135 8439037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0642 35 697 Receptor kinase-like Gene Family AT2G23450 59.496 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod02g0642 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0642 - - gmx:100779130 1006.9