Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0629 ATGGGAATAGCAACACCACCACCACTGCTTCCATCCATTCTTTCTCACTCATCCTCCTCAAAGACGACGACACACCACACAAGTGATAACTTCTCTCCCAACAATAACAACTCTATGTCCCAGGATTACCAACAAGGAATCTTCAGCTTCTCGAATGGGTTCGAGAGATCCGCAATGACACACCAACAACACTTGGCACAACAGCAGCAGCAGCAGCAACAACAGCAGATCCGGAGGGACAACAAAGTAGTGAGGTTGCAACAACAAGGATTCGAGGCACCGCCACCACCATTAGTAGGAATAGAGGAAGAACCCGAAGGAGGAGGAGGAGGAGGGCTTCCACCGGGAGTTTACGAAACCGCAGGGATGCTGTCGGAGATGTTCAATTTCCCTCCTGCAGCCACCGCCAACGCCGCCGAGCTGCTCGAACACCAGCAGGTGACGGCGGCGTTTCGATCCCCTTCATCGTCTTCCTCCTCGAGGCCGCCACAAGAGTGGTACGGAAGCAGACAAAGCATGATGGTAAGTGGGTTGGGTCCCTTGGGAGACTCAAAGAACCAAAACGCAACAAGCGTGAGCCACCACCATCACCACCACCCACAGATTTCAGGCATTAATGCTGCTGCTGCTGACTCCATGCAGCTTTTTCTCATGAACCCTCACACCACTAGATCTCCTTCTCCTACTCCTCCTCCATCCGCTGCTGCTACGTCTTCCACGCTCCACATGCTTCTCCCCAACCCTTCCTCTAATTCTTTACAAGGGTTCAATTCCGGACCCGGAGGGTCTTTTGGACAATTCACATGGGTCCCTGATAGCGGTCAGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTGCAGGTGGCACTAACAACAACCCCGGTCATGAAATTGGTGGGGTTAACGTTGTTGAAGGGCAAGGGCTTTCGTTGTCGTTGTCGTCTTCGTTGCAGCACCTGGAAGCTGCGAAAGCTGAGGAATTAAGGATGGGGGAGAGTGGTTTTCTTTATTACAACCAAGGGGGTGGAGGCCCTTCTTCTAATTCGACTCAGTATCCGTACAAGAGCTTGGGTGGTGGCGGTGTTGGTCACCATCACCACCAGGCATTGCATTTGCAAGGTGCCATGGGACAGAACCACCAGGGGCACATTGGGTATGGCTCATCTTCCTTAGGTGTAGTGAATGTCCTTAGAAATTCCAAATATGTGAAGGCTGCACAGGAGTTGCTTGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGACCAAGTTCAGTAGGCAGAATTCAAACCCTAATTCGAATCCCGGCGGCGGTGCCGGCGGTGGTTCGTCGTCGTCGTCGAAGGATCCTGCTCCTCCTCCTTTGTCAGCGGCAGATAGGATTGAGCATCAAAGAAGGAAGGTCAAACTTCTATCAATGCTTGATGAGGTGGACAGGAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACTCATTCGATCTTGTGATGGGTTTCGGGGCGGCGGTGCCGTACACGGCGCTGGCGCAGAAGGCGATGTCACGGCACTTCCGGTGCCTGAAGGATGCGATAACAGCGCAGCTGAAGCACAGCTGCGAGGTGCTGGGAGAGAAAGATGGGGCGGGGACCTCAGGATTGACGAAAGGAGAGACCCCGAGGCTGAAGATGCTGGAGCAGAGCCTGAGGCAGCAGAGGGCCTTCCACCAGATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGCCTTCCTGAACGATCTGTCAACATTTTGAGAGCTTGGCTTTTCGAGCATTTTCTGCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGCCTATCGAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTTAAAGATGCAGAGAGCGCAGAAGGGAGGGACAAGAACGTGCAAAGCAGCAACAGCAATAACAGTGGAAACCAAGCAGCACAAACTCCAACCACGCCAGCGGCAACAGCTACAACATCAACAGCAACAACAGCGCCACCACCACAACCAACAACAGCAACAGCAACAACAGCAGGCAAAAGATCCGATATCAATGCTGGTGGTGAAAGCGACCCTTCACTCGCTGCAATCAATAGACAAGCCTTCTCGGAAAACCAAGCGAACTCCACCACCGCGAGCACCGCCGTTATGGCCACCAACGCCACCGCCTCTGAGGTGGCTCACTGCTACGACTCAGGCCTGCCCCTACAAAGATCGATGGCCGCAGATGACACGTGTCGCCACGGCAGCAACGTTGCAGGGTCGGATTATGGGACCGCTTCTGCGAGTGCTGACATTGGATCCACTCTCATTAGGTTTGGGACCACCGCCGGTGACGTGTCACTCACCCTAGGGTTACGCCACGCCGGGAACATGCCCGAGAAAACTCCTTTCTCTGTTAGAGATTTTGGAGGCATTTAA 2514 0.5326 MGIATPPPLLPSILSHSSSSKTTTHHTSDNFSPNNNNSMSQDYQQGIFSFSNGFERSAMTHQQHLAQQQQQQQQQQIRRDNKVVRLQQQGFEAPPPPLVGIEEEPEGGGGGGLPPGVYETAGMLSEMFNFPPAATANAAELLEHQQVTAAFRSPSSSSSSRPPQEWYGSRQSMMVSGLGPLGDSKNQNATSVSHHHHHHPQISGINAAAADSMQLFLMNPHTTRSPSPTPPPSAAATSSTLHMLLPNPSSNSLQGFNSGPGGSFGQFTWVPDSGQEGGGGGGGGGSAGGTNNNPGHEIGGVNVVEGQGLSLSLSSSLQHLEAAKAEELRMGESGFLYYNQGGGGPSSNSTQYPYKSLGGGGVGHHHHQALHLQGAMGQNHQGHIGYGSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKTKFSRQNSNPNSNPGGGAGGGSSSSSKDPAPPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCEVLGEKDGAGTSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKDAESAEGRDKNVQSSNSNNSGNQAAQTPTTPAATATTSTATTAPPPQPTTATATTAGKRSDINAGGESDPSLAAINRQAFSENQANSTTASTAVMATNATASEVAHCYDSGLPLQRSMAADDTCRHGSNVAGSDYGTASASADIGSTLIRFGTTAGDVSLTLGLRHAGNMPEKTPFSVRDFGGI* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0629 837 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 101 826 - -
Dod02g0629 837 SMART prehox3 391 530 IPR006563 -
Dod02g0629 837 MobiDBLite consensus disorder prediction 662 714 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 59 114 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 652 723 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 148 201 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 11 46 - -
Dod02g0629 837 Gene3D - 585 647 - -
Dod02g0629 837 ProSiteProfiles 'Homeobox' domain profile. 579 642 IPR001356 GO:0003677
Dod02g0629 837 CDD homeodomain 582 643 IPR001356 GO:0003677
Dod02g0629 837 MobiDBLite consensus disorder prediction 424 464 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 234 265 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 219 265 - -
Dod02g0629 837 SUPERFAMILY Homeodomain-like 584 649 IPR009057 -
Dod02g0629 837 MobiDBLite consensus disorder prediction 59 83 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 1 46 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 272 291 - -
Dod02g0629 837 MobiDBLite consensus disorder prediction 424 453 - -
Dod02g0629 837 SMART HOX_1 582 646 IPR001356 GO:0003677
Dod02g0629 837 Pfam Homeobox KN domain 599 638 IPR008422 GO:0003677|GO:0006355
Dod02g0629 837 Pfam Associated with HOX 396 529 IPR006563 -
Dod02g0629 837 MobiDBLite consensus disorder prediction 148 171 - -
Dod02g0629 837 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 101 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0629 Dod-Chr2 8301423 8309471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0629 36 629 Homeobox Transcription Factor Family AT4G36870 50.478 6.48e-150 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod02g0629 POX 2.2e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0629 - - tcc:18611010 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0629 02 8301423 8309471 Dod02g0629 02 8301423 8309471 ECH