Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0623 ATGCATGAAATCTCAGCACATATCTTAACAGCAGCTCAATCGCAACAGGCCAGAGGAACAAACTTTTCATGCCCTGTGGATTCACCTCCTTCATGCGAAACGTACGTGACATACATTTCCCAGTCTCCAAATTTCTTGAGCCTGGCCAACATATCTGACATATTTGGCACCAGCCCTCTATCCATTGCAAGAGCCAGTAACTTAAAGGCAGAGGATAACAAGCTGATTCCAGGCCAAGTCTTACTGGTACCTGTAACTTGTGGTTGCACACGAAATCGCTCTTTTGCCAATATCACCTACGGGACAGAAAAAGGTGATACCTACTACTTTGTTTCAACGACTACATACGAGAATCTCACCAATTGGCACGTAGTGATGGATTCAAACCCTGGCCTAGAACCATATCTGCTGCAAGTAGCCACCAAAGTAGTGTTCCCTTTATTCTGCGGGTGCCCTTCAAAGAACCAGTTGGAGAAAGGGATAAACTATTTGATCACTTATGTGTGGCAGCCAAATGACAACGTTTCCCTTGTAGCTGCCAAGTTTGGTGCATCACCAGTAGACATATTGGCTGCAAACAACTACGGTGAAAACTTCACTGCTGCAGCAACCTACCTTCCAGTTTTGATCCCTGTGACAAGGTTGCCGGTTCTTGCCCAACCCAGTCCTCCAAATGAAAGAAAGAGCAGCATTCAACTTCCGGTTATAATTGGTATTAGCCTGGGATGCACACTGCTGGTTGCAGTTTTAGCAATGTTATTTGTTTTTGTTTATTATCTGAAAAAGAAGAGTTTAAATAGGGGTGCTTCTTATGCTGAGACTGCAGATAAGTTACTCTCCGGAGTTTCAGGCTATGTAAGTAAGCCAACCTTGTATGAAACTGGTGCAATTATGGAAGCTACCATGAACCTCAGTGAACAGTGCAAGATTGGGGAGTCAGTGTACAAGGCCAAGATTGAAGGCAGGGTCTTAGCAGTGAAAAAGGTGAAGGAAGTTGTTTCAGAGGAGCTGAAGATTCTGCAGAATGTAAATCATGGGAATCTGGTGAAACTAATGGGTGTCTCTTCAGACAGCGATGGAAACTGTTTCCTGGTTTATGAATTTGCTGAAAACGGGTCCCTTGATGACTGGCTGTTCTCCAAGTCTTGTGGAACCTCAAACTCAACGGGCTCCCTCACATGGTATCAGAGGATTAACATAGCAGTGGATGTTGCCATGGGTTTGCAATACATGCATGAGCATACTTACCCAAGAATCGTCCACAGGGACATCACAAGTAGTAACATCCTTCTTGACTCCAACTTCAAGGCCAAGATAGCAAACTTCTCCATGGCCAGGACTTCTACTAATCCTATGATGCCCAAGATAGATGTATTCGCTTTCGGGGTGGTTCTGTTACAGTTGCTTACGGGCAAGAAAGCTGTGACAACCAAAGAAAATGGTGAGGTGGTTTTGCTGTGGAAGGATATGAGGAAGATTTTTGAAGTAGAAGAGGAGAGGGAGGAGTGGCTCAAAAGATGGATGGATCCTAAGCTGGAGAGCTTGTATCCTGCAGACAAGGCTCTCAGCTTGGCCTCTTTGGCAGTGGATTGCACGGCTGATGTGTCTTTGTCCAGACCAACCATGGCAGAAGTTGTTCTTAGCCTCTCCCTTCTCACTCAACCATCTCCTGCCACATTCGAGAGATCATTGACTTCTGGGTTGGATGCAGAAGTTAATCATGTGGTCACACCCATAGCAGCTCGTTGA 1749 0.4528 MHEISAHILTAAQSQQARGTNFSCPVDSPPSCETYVTYISQSPNFLSLANISDIFGTSPLSIARASNLKAEDNKLIPGQVLLVPVTCGCTRNRSFANITYGTEKGDTYYFVSTTTYENLTNWHVVMDSNPGLEPYLLQVATKVVFPLFCGCPSKNQLEKGINYLITYVWQPNDNVSLVAAKFGASPVDILAANNYGENFTAAATYLPVLIPVTRLPVLAQPSPPNERKSSIQLPVIIGISLGCTLLVAVLAMLFVFVYYLKKKSLNRGASYAETADKLLSGVSGYVSKPTLYETGAIMEATMNLSEQCKIGESVYKAKIEGRVLAVKKVKEVVSEELKILQNVNHGNLVKLMGVSSDSDGNCFLVYEFAENGSLDDWLFSKSCGTSNSTGSLTWYQRINIAVDVAMGLQYMHEHTYPRIVHRDITSSNILLDSNFKAKIANFSMARTSTNPMMPKIDVFAFGVVLLQLLTGKKAVTTKENGEVVLLWKDMRKIFEVEEEREEWLKRWMDPKLESLYPADKALSLASLAVDCTADVSLSRPTMAEVVLSLSLLTQPSPATFERSLTSGLDAEVNHVVTPIAAR* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0623 582 ProSiteProfiles LysM domain profile. 36 83 IPR018392 -
Dod02g0623 582 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 8 582 - -
Dod02g0623 582 Pfam Protein tyrosine and serine/threonine kinase 328 448 IPR001245 GO:0004672|GO:0006468
Dod02g0623 582 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 8 582 - -
Dod02g0623 582 ProSitePatterns Tyrosine protein kinases specific active-site signature. 419 431 IPR008266 GO:0004672|GO:0006468
Dod02g0623 582 Gene3D Phosphorylase Kinase; domain 1 283 368 - -
Dod02g0623 582 ProSiteProfiles Protein kinase domain profile. 272 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0623 582 Gene3D Transferase(Phosphotransferase) domain 1 451 564 - -
Dod02g0623 582 SUPERFAMILY Protein kinase-like (PK-like) 297 549 IPR011009 -
Dod02g0623 582 Gene3D Transferase(Phosphotransferase) domain 1 369 450 - -
Dod02g0623 582 Pfam LysM domain 47 84 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0623 Dod-Chr2 8029453 8032929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0623 66 552 Receptor kinase-like Gene Family AT3G21630 32.661 7.10e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod02g0623 PK_Tyr_Ser-Thr 5.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0623 - - gmx:100301877 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0623 02 8029453 8032929 Dod02g0623 02 8029453 8032929 ECH