Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0614 ATGGCGAGTGGTTTTGGGGAATCAACGAGAGCTTCTGCGTCTCCACCGAGCCCGTCGTGCTCGGGGAACAACGGTTCAAACGATGCCGGTGATTTCGAATGCAACATATGCTTTGATTTAGCTCAGGATCCAGTGATCACACTGTGTGGCCACCTTTTCTGCTGGCCATGTTTGTATAGGTGGCTTCACCACCACTCCCATTCACAAGAGTGCCCTGTTTGCAAGGCCCTCATTCAGGAAGAGAAATTGGTTCCCCTTTATGGGAGGGGCAAGACACAGACTGATCCTAGGAACAAGTCTTATCCTGGGATGGAGATTCCTCACAGGCCTTCGGGGCAGCGCCCGCAGACGGTGCCGCCCCCGCCGCCTCCTCCTCATCCAGAGGCTAACCCTTTTGGGAATTATGGGTTTGGATTGATGGGGGGTTTCATTCCCATGGCTACTGCTAGGATTGGAAACTTCACGCTTTCCACTGCTTTTGCTGGCCTGTTACCATCTCTGCTCAACATTCAGTTCCATGGTTTCCAAGATGCCACTGTCTATGGGACAACTTCTGGTTATCCCTTTAGTTTTAACACGTTTCACGGAGGGAATGCGCGGGGTTTTTCGCAGGGGGCCGGTCAGGTGCAGCGGCAGGAGGACAGTGTTTTGAAGAATCTGCTTTTGTTGATTGGGGTACTTGTCCTTCTTACAGTCATCTTTGTGTGGTGA 711 0.5204 MASGFGESTRASASPPSPSCSGNNGSNDAGDFECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHSHSQECPVCKALIQEEKLVPLYGRGKTQTDPRNKSYPGMEIPHRPSGQRPQTVPPPPPPPHPEANPFGNYGFGLMGGFIPMATARIGNFTLSTAFAGLLPSLLNIQFHGFQDATVYGTTSGYPFSFNTFHGGNARGFSQGAGQVQRQEDSVLKNLLLLIGVLVLLTVIFVW* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0614 236 MobiDBLite consensus disorder prediction 1 24 - -
Dod02g0614 236 SUPERFAMILY RING/U-box 30 87 - -
Dod02g0614 236 Pfam Zinc finger, C3HC4 type (RING finger) 33 74 - -
Dod02g0614 236 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 2 234 IPR045103 GO:0005783|GO:0006511|GO:0061630
Dod02g0614 236 CDD RING-HC_AtRMA_like 32 76 - -
Dod02g0614 236 MobiDBLite consensus disorder prediction 88 131 - -
Dod02g0614 236 PANTHER RING ZINC FINGER PROTEIN-RELATED 2 234 - -
Dod02g0614 236 ProSitePatterns Zinc finger RING-type signature. 49 58 IPR017907 -
Dod02g0614 236 SMART ring_2 34 74 IPR001841 -
Dod02g0614 236 ProSiteProfiles Zinc finger RING-type profile. 34 75 IPR001841 -
Dod02g0614 236 MobiDBLite consensus disorder prediction 113 130 - -
Dod02g0614 236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 98 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0614 Dod-Chr2 7919733 7920443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0614 23 234 C3H Transcription Factor Family AT2G23780 62.037 7.72e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0614 K10666 - gmx:100814783 411.379