Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0600 ATGAATCATCGACCTATCGAAGACCATATGATGCTCATCCCTCAACTATATCCTGCCGGTGCATACACTCAAATAATTGCTCAACAAGGGGAGAATAAGAAGCCAAGGCGCCGGCGTAACAAGAAAAACAAAGGAGGAGAAAACGGGGGTGCGGAGGGAAACAAGAAGAGGAAGCTGAGTGCGCAGCAAGTGAATCTGCTTGAGCTAAACTTTGGAAATGAACACAAGCTTGAGTCCGAAAGGAAGGACAAGCTTGCACTGGAGCTTGGTTTGGATCCCAGACAAGTCGCTGTGTGGTTTCAGAACAGAAGAGCTCGTTGGAAGAACAAGAAATTGGAGGAAGAGTACTCCAGCCTTAAAAAAGCACATGAAACCTCCATGCTCGAGAAATGCCGCCTTGAAACTGAGGTGTTGAAGCTGAAGGAGCAGCTTTCTGAAGCCGAGAAAGAGATTCAGCGGCTGCTAGAGAGAGTTCCTAGCAACAGCACAAGTTCACCACAGTCACAGTCAATCGAATTGGAAGCGGTGGACCCACCATTTCTCGGAGAGTTTGGAGTGGTGGATGGATATGACGATGATGTGTTTTACGTACCTGATCAGAACCATTACATCAATGGCATGGAGTGGATTAATTTTAATTTGTACATGTGA 651 0.4639 MNHRPIEDHMMLIPQLYPAGAYTQIIAQQGENKKPRRRRNKKNKGGENGGAEGNKKRKLSAQQVNLLELNFGNEHKLESERKDKLALELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKAHETSMLEKCRLETEVLKLKEQLSEAEKEIQRLLERVPSNSTSSPQSQSIELEAVDPPFLGEFGVVDGYDDDVFYVPDQNHYINGMEWINFNLYM* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0600 216 MobiDBLite consensus disorder prediction 28 59 - -
Dod02g0600 216 Pfam Homeodomain 55 109 IPR001356 GO:0003677
Dod02g0600 216 CDD homeodomain 55 111 IPR001356 GO:0003677
Dod02g0600 216 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 7 215 IPR045224 GO:0003700
Dod02g0600 216 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 7 215 - -
Dod02g0600 216 ProSiteProfiles 'Homeobox' domain profile. 50 110 IPR001356 GO:0003677
Dod02g0600 216 Gene3D - 46 120 - -
Dod02g0600 216 SUPERFAMILY Homeodomain-like 54 119 IPR009057 -
Dod02g0600 216 PRINTS Lambda-repressor HTH signature 90 106 IPR000047 GO:0003677
Dod02g0600 216 PRINTS Lambda-repressor HTH signature 81 90 IPR000047 GO:0003677
Dod02g0600 216 ProSitePatterns 'Homeobox' domain signature. 85 108 IPR017970 GO:0000981|GO:0006355
Dod02g0600 216 SMART HOX_1 53 114 IPR001356 GO:0003677
Dod02g0600 216 Coils Coil 102 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0600 Dod-Chr2 7758601 7761064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0600 1 211 Homeobox Transcription Factor Family AT2G18550 54.299 8.16e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dod02g0600 Homeodomain 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0600 K09338 - gmx:100809616 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0600 02 7758601 7761064 Dod02g0600 02 7758601 7761064 ECH