Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0597 ATGAGAGTTTCCGTTTCCCCATCCCCACAGAACAACAACAACAGCAACAACCATTCCCATAACTCCCCAAACCCAAAGCCCACTACCACCAACAATAACAACAACAGCAACAACACACCCCGCACCATTGCCCTCCCCACCGCTCCCAACAATCCAAGCCTGTGCTACGAGCCCACCTCAGTGCTCGACCTGTGCGGCAGCCCCACGCTACCAGAAAAGCCAGCCCCGGTTCCCAACTCCCAGGAGTGCCAGCTCGACCTGGAAGACCATGTGTTGCACAACTTGGACTGGGACTCCATCATGAAGGACCTGGGCTTCCACGACGACTCCAACCCGCCGGGCATCTTCAAGACCATTCTCCACCCCAACCCCAACCCCAACCCAAGCCAGAACCCGAACCCGAACCCGAACCCATCCCCATCATGCGACCTGCCTGACTTCCCTCCCTTCGAAGCCCCAACCGAATTCACCGACCTCCAAACCATGCCCTACACCAACCCAAACTATCCCACCACCTTAGACCACCTTCTCCATGACCCCAATAACTCCAATTGGACCTCCTCCACCATCGGCTTCGATTTAATTGAGGAGCTCATCCGCGCCGCCGATTGCTTCGACACCAACCAGCTCCACGTGGCCCACGTGATATTGGAGCGGCTCAACCAACGCCTCAGATCCCCCCCGGCCGGAAAACCTCTCCATAGAGCGGCGTTCTACTTCAAGGAAGCCCTCCAGAACCTTCTCTCCGGTTCGAACCGGACCCCGCGACTCTCCTCCCTCGTGGAGATCGTGCACTCCATCAGAACCTTCAAGGCCTTCTCCGGAATCTCACCGATCCCCATGTTCTCCATCTTCACCACCAACCAGGCACTCCTCGAAGCCTTCCACAGCTCCTCCTTCATGCACGTCGTTGATTTCGACATCGGATTAGGGATCCAGTACGCTTCGCTCATGAAGGAGATCGCCGAGAAGGCCGAGAACTTGAAGCTGAACTCGCCGCTGCTTCGTATCACCGCCGTGGTCCCTGAAGAGTACGCTGTGGAGAGCGCGCTGATCCGCGAGAACCTCAGCCAGTTCGCGAACGAGCTTCGGATCCGTGTCCAGGTCGAGTTCGTGCTGCTACGCACCTTCGAGACGCTGTCGTTTAAGGCCGTGAGGTTCGTAGAAGGGGAGAAGACCGCGGTGCTCCTCTCACCGGCGATATTCCGCCGCCTCGGATCCGCCGGGAACACCGCCGCGTTCCTCGCGGACGTTCGGAGGGTTTCGCCTAGCGTGGTGGTGTTCGTGGACGGGGAGGGGTGGACGGAGGCGGCGGCAGCGGCGTCGTTCCGGCGCGGCGTGGTGAGCAGTTTGGAGTTCTATTCGATGATGTTGGAGTCGCTGGACGCGTCGATGGTGGGAGGGGGAGGGGATTGGGTGAGGAGGATCGAGATGCTGCTTCTGCGGCCGAAGATACTGGCGGCGGTGGAGGGTGCAGGGCGGCGTGTTCCGCCGTGGAGAGAGGCGTTTTACGGCGCCGGGATGAGGCCCGTTCAGCTGAGCCAGTTCGCGGATTTTCAGGCGGAGTGCTTGCTGGCGAAGGTGCAGATCAGGGGCTTCCACGTGGCAAAACGCCAGGCTGAGCTGGTGCTCTTGTGGCACGAGAAGGCCATGGTTGCCACCTCAGCTTGGCGCTGTTAG 1680 0.6 MRVSVSPSPQNNNNSNNHSHNSPNPKPTTTNNNNNSNNTPRTIALPTAPNNPSLCYEPTSVLDLCGSPTLPEKPAPVPNSQECQLDLEDHVLHNLDWDSIMKDLGFHDDSNPPGIFKTILHPNPNPNPSQNPNPNPNPSPSCDLPDFPPFEAPTEFTDLQTMPYTNPNYPTTLDHLLHDPNNSNWTSSTIGFDLIEELIRAADCFDTNQLHVAHVILERLNQRLRSPPAGKPLHRAAFYFKEALQNLLSGSNRTPRLSSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQALLEAFHSSSFMHVVDFDIGLGIQYASLMKEIAEKAENLKLNSPLLRITAVVPEEYAVESALIRENLSQFANELRIRVQVEFVLLRTFETLSFKAVRFVEGEKTAVLLSPAIFRRLGSAGNTAAFLADVRRVSPSVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASMVGGGGDWVRRIEMLLLRPKILAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLLWHEKAMVATSAWRC* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0597 559 MobiDBLite consensus disorder prediction 1 51 - -
Dod02g0597 559 MobiDBLite consensus disorder prediction 112 154 - -
Dod02g0597 559 ProSiteProfiles GRAS family profile. 185 558 IPR005202 -
Dod02g0597 559 MobiDBLite consensus disorder prediction 125 147 - -
Dod02g0597 559 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 558 IPR005202 -
Dod02g0597 559 PANTHER SCARECROW-LIKE PROTEIN 15 22 558 - -
Dod02g0597 559 Pfam GRAS domain family 194 558 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0597 Dod-Chr2 7720704 7723233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0597 84 558 GRAS Transcription Factor Family AT4G36710 55.165 2.06e-167 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod02g0597 GRAS 2.1e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0597 - - aip:107640116 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0597 02 7720704 7723233 Dod02g0597 02 7720704 7723233 ECH