Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0594 ATGCCGGTTGATCTAGACAATGTTTCAACAGCTTCAGGGGAAGCTAGTGTCTCTTCGTCTGGCAATCAGACAGTACCCCCAAAATCCACCGCCAAGAAAAAACGAAACCTCCCAGGAATGCCAGATCCAGATGCAGAGGTGATAGCTCTGTCTCCGAAGACCCTTTTGGCCACAAACCGATTCGTGTGCGAAATCTGCAACAAAGGGTTCCAGAGGGATCAGAACCTTCAGCTTCACCGAAGGGGTCACAACCTTCCATGGAAACTGAGGCAGAGGTCAAGCAAAGAGGTCAGGAAAAGGGTCTACGTCTGTCCAGAGCCAACTTGCGTTCACCACGACCCTTCAAGGGCACTTGGTGATCTCACAGGTATCAAAAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCCAAGAAATACGCCGTTCAATCGGATTGGAAAGCTCACTCTAAGATTTGCGGTACCAGAGAGTACAAATGCGATTGTGGGACTCTGTTTTCAAGGAGGGATAGCTTCATCACGCACAGGGCTTTCTGTGATGCGTTGGCAGAGGAGAGTGCGAGATCTCAGACTCAGTCTCAAACAACGCAGGCTCAGGCTGGTGTGAAAGTTAGTCCTGACTCAGATTCCAAGGTTGTGACCGGTGATTCTTCATCGCCTCAGGCGGCGCCACCGCCTCCCCCGCCTCCTCCTCCTGCACCGGCACTGGCACCGGCACCGCCGGCTACTACTACTACTACTACTCAGTCAAACAGTGTTGTGGTTGCATCGGCTTTGCAGGCGCAGAATCCTGAGTTGCCAGAAAATTCTCCACAAATTATAGAGGAACCACAAGCCAATACTGCTCTAAATGGGAGCTGTAGCAGCAGCACTAGCTCAACAAGCAATGGTGGTACTAGCAGCAGCAGTGTATTTGCAAGCTTGTTTGCTTCATCAACTGCATCTGCAAGCCTGCAAACCCAAACACCAGCATTTACTGATCTAATTAGGGCCATGGGGCGCCCTGATCATTCGGCAGACCTCCCAGGGCCTTCGTCTTCGGAGCCAATTTCTTTGTGCCTCGCCACCAACCATGGCTCATCAATTTTTGGAACAGGAGGGCAGGAACGCCGCCAGTATGCCCCGCCGCCACAGCCGGCCATGTCCGCCACTGCGCTGCTGCAGAAAGCAGCTCAAATGGGTGCAGCTGCAACCAATGCTTCACTGCTACGCGGGCTAGGCATAGTGTCATCTTCTGCTTCATCTTCTCCAGCACAGCAAGATGGTTTGCAGTGGGGTCAGCGGCCTGTGGAACCCGAGAATGCCTCAGTTCCTGCAGGGCTTGGACTCGGGCTCTCTTTCGACAGTGGCTCTGGACTGAAGGAACTAATGATGGGGACTCCCTCCATGTTTGGTCCAAAGCATACCACCCTCGATTTTCTTGGATTGGGGATGGCTGCTGGGGGCACCCCTGGTGGAGGCTTATCAGCACTCATCACATCCATTGGTGGTGGCTTGGATGTTACTGCTGCGGCAGCGGCAGCATCCTTTGGTAACGGAGAGTTCTCTGGCAAAGATATCGGGAGGAGCACATGA 1593 0.5317 MPVDLDNVSTASGEASVSSSGNQTVPPKSTAKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSQTQSQTTQAQAGVKVSPDSDSKVVTGDSSSPQAAPPPPPPPPPAPALAPAPPATTTTTTQSNSVVVASALQAQNPELPENSPQIIEEPQANTALNGSCSSSTSSTSNGGTSSSSVFASLFASSTASASLQTQTPAFTDLIRAMGRPDHSADLPGPSSSEPISLCLATNHGSSIFGTGGQERRQYAPPPQPAMSATALLQKAAQMGAAATNASLLRGLGIVSSSASSSPAQQDGLQWGQRPVEPENASVPAGLGLGLSFDSGSGLKELMMGTPSMFGPKHTTLDFLGLGMAAGGTPGGGLSALITSIGGGLDVTAAAAAASFGNGEFSGKDIGRST* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0594 530 MobiDBLite consensus disorder prediction 417 440 - -
Dod02g0594 530 MobiDBLite consensus disorder prediction 191 255 - -
Dod02g0594 530 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Dod02g0594 530 MobiDBLite consensus disorder prediction 226 245 - -
Dod02g0594 530 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Dod02g0594 530 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 7 529 - -
Dod02g0594 530 MobiDBLite consensus disorder prediction 1 43 - -
Dod02g0594 530 MobiDBLite consensus disorder prediction 191 225 - -
Dod02g0594 530 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 529 - -
Dod02g0594 530 Gene3D Classic Zinc Finger 115 196 - -
Dod02g0594 530 MobiDBLite consensus disorder prediction 288 307 - -
Dod02g0594 530 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Dod02g0594 530 SMART c2h2final6 102 132 IPR013087 -
Dod02g0594 530 SMART c2h2final6 61 83 IPR013087 -
Dod02g0594 530 SMART c2h2final6 137 157 IPR013087 -
Dod02g0594 530 MobiDBLite consensus disorder prediction 9 30 - -
Dod02g0594 530 Gene3D Classic Zinc Finger 41 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0594 Dod-Chr2 7696274 7700436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0594 1 530 IDZ Gene Family AT5G66730 61.101 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g0594 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0594 K25869 - gmx:100806404 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0594 02 7696274 7700436 Dod02g0594 02 7696274 7700436 ECH