Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0590 ATGGCCTCTTCTATCATGGAGAGGGGTGGCGAGGTAGAACGGTTCAACAAACATGCTTTTGCCTGTGCAGTAGTCGCTTCCATAGTATCCATTATATTTGGTTATGATACCGGTGTTATGAGCGGAGCCATGATATTCATAAAGGAGGACCTCGGAATCAGCGACACCCAGCAAGAGGTCCTAGCAGGCATCCTGAACCTGTGCGCACTGGTTGGATCCCTGGCCGCAGGAAGGCTGTCAGATCACATTGGACGACGCTACACAATCGCAGTAGCCTCAGCACTCTTCATGCTTGGTGGAGTCCTCATGGGATACGGCCCAAACTACGCACTTCTAATGTTTGGAAGGTGCGTTGCCGGCGTCGGAGTGGGCTTTGCTCTCATGATAGCACCAGTTTACTCTGCAGAAATCTCCTCTGCCAAGTCCCGTGGCCTTCTAACCTCACTCCCCGAGCTTTGCATCGGTGTTGGTATCTTACTCGGCTACGTGTTAAACTACTTCTTCGGGAAATTGCCCCTGAAGCTTGGCTGGAGATTGATGCTTGGTGTAGCAGCGGTTCCTTCACTTGCCTTGGCTTTGGTGATTCTAGCAATGCCAGAGTCACCAAGGTGGCTCGTCATGCGTGGCAAACTAGGAAGCGCAAAGAAAGTGCTATTGCTAGTCTCGAACACTGAACAAGAGGCTGAACTTCGGTTCAAGGATATCAAACTCGCAGCTGGAGTTGAAGAGAATTGTGCAAACGATGACGACGTGGTTGTTAAGCCTTCTCAGGATAATAACAAGAGCCATGTTGAAGGGGTTTGGAAAGAGCTGCTTCTGAGACCCTCTCGTTCCGTTCGTTGGATGCTTATAACAGCAGTTGGGATTCACTTCTTCGAGCACGCAACTGGGATAGAAGCTGTTATGTTATATAGTCCAAGAATATTCAAGAAAGCAGGTGTTACAGGCAAGGACAAGCTCTTGCTCACAACAATTGGGGTAGGCCTTACGAAGGTTGTTTTCTTGGTCATATCGTCTTTCTTGCTTGATAGAGTTGGGAGAAGGCGACTCTTGCTAATAAGCACCGGCGGCATGGTTTGTGGCCTTGCGGTGTTGGGGTTCAGCTTGACCGTAGTGAATGATTCCAAGGATAGGCTCTTGTGGGCTTTGACACTGAGCATAGCGGCCACTTACACTTTTGTTGCGTTTTTTAATATTGGGCTTGGGCCTGTGACGTGGGTCTATAGCGCCGAGATTTTTCCATTGAAGTTGAGAGCACAAGGGGCGAGTATTTGTGTTGCGGTGAATAGGGTCATGAATGCTGCTGTTTCCATGAGCTTTCTTTCGATCTACAAAGCAATCACTATAGGTGGGGCGTTTTTCATGTTTTCGGGTATATCTATATTGGCTTGGTTGTTCTTCTATTTTTTCCTCCCTGAGACCAAGGGCAGGGCCTTGGAAGAGATGGAGATGGTTTTCAACAAAAAATCTAGTAAAGATGTCCCTGCAGCAAGTGATCATTCGAGACAGTATGCGTAG 1518 0.4829 MASSIMERGGEVERFNKHAFACAVVASIVSIIFGYDTGVMSGAMIFIKEDLGISDTQQEVLAGILNLCALVGSLAAGRLSDHIGRRYTIAVASALFMLGGVLMGYGPNYALLMFGRCVAGVGVGFALMIAPVYSAEISSAKSRGLLTSLPELCIGVGILLGYVLNYFFGKLPLKLGWRLMLGVAAVPSLALALVILAMPESPRWLVMRGKLGSAKKVLLLVSNTEQEAELRFKDIKLAAGVEENCANDDDVVVKPSQDNNKSHVEGVWKELLLRPSRSVRWMLITAVGIHFFEHATGIEAVMLYSPRIFKKAGVTGKDKLLLTTIGVGLTKVVFLVISSFLLDRVGRRRLLLISTGGMVCGLAVLGFSLTVVNDSKDRLLWALTLSIAATYTFVAFFNIGLGPVTWVYSAEIFPLKLRAQGASICVAVNRVMNAAVSMSFLSIYKAITIGGAFFMFSGISILAWLFFYFFLPETKGRALEEMEMVFNKKSSKDVPAASDHSRQYA* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0590 505 PRINTS Sugar transporter signature 113 132 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0590 505 PRINTS Sugar transporter signature 410 422 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0590 505 PRINTS Sugar transporter signature 30 40 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0590 505 PRINTS Sugar transporter signature 387 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0590 505 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0590 505 ProSitePatterns Sugar transport proteins signature 2. 118 143 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod02g0590 505 Pfam Sugar (and other) transporter 22 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod02g0590 505 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 475 IPR020846 GO:0022857
Dod02g0590 505 Gene3D MFS general substrate transporter like domains 12 491 IPR036259 -
Dod02g0590 505 ProSitePatterns Sugar transport proteins signature 1. 338 355 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod02g0590 505 SUPERFAMILY MFS general substrate transporter 13 483 IPR036259 -
Dod02g0590 505 TIGRFAM SP: MFS transporter, sugar porter (SP) family 18 482 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod02g0590 505 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 10 493 IPR045262 GO:0015144
Dod02g0590 505 ProSitePatterns Sugar transport proteins signature 1. 76 93 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod02g0590 505 PANTHER POLYOL TRANSPORTER 3-RELATED 10 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0590 Dod-Chr2 7625048 7628544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0590 16 492 Organic Solute Cotransporters AT4G36670 67.296 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0590 - - gmx:102661233 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0590 02 7625048 7628544 Dod02g0590 02 7625048 7628544 ECH
Dod03g3125 03 63846630 63850280 Dod02g0590 02 7625048 7628544 ECH