Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0581 ATGTTCTGTGGTTGTTGTTCTTATATCTGCTTCTTTGCAGATGATCCACATAATGACCCAAATATATCTGGAGATCCATACAAAACATTGTTTGTGGCCAAACTCAGTTATGAGACCTCTGAGAGCAGACTCAAAAGGGAGTTTGAGTCGTATGGTCCAATCAAACGGGTGAGATTAGTTGCTGACAAAGCATCAAATAAGCCCAGGGGTTATGGTTTCATTGAGTACCTGCATACAAGGGACATGAAAGCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTCGAAGGGTGCTTGTGGATGTTGAGCGTGGGAGGACTGTTCCTAATTGGCGACCTCGCCGCCTTGGTGGTGGGCTTGGTACTACTAGAGTTGGGGGTGAAGAAGTAAATGAGCATCATTCTGGGAGGGAGCAACAGCAGTCTCGTTCTGAAGAACCAAGAGCACGGGAGGATCGACATGCCGATCGGGACAGAGAAATATCACGTGAAAGAGGTAGGGATAGAGACAGAGAGCGGTCACGTGAGCATTCTCATGAAAGGGTGAGGGATCGGGATTATAGAGAGGATAGGCACCATAGAGACCGGGATAGGACCAGGGACAAAGACAGGGAAAGGGACAGAGATAGAGACAGAGATCGTGGACGTGACCGAGATAGAGCGCGTGATCGAGATCGTGACCGTGAGCGAGAGAGGGACCGTGATCGGCATCGTGAAAGGGATAGAGATTATGAAGTTGGGGATACTGATCGTGGACGGTCACGTGATAGGGAGTCTGATTATGATCGTGTTGAATCTAAACATGAGAGGGACCGGCATGGTGAAAGGGAGCGTGACTATGAGCCTGAGGATGATCGTGGTTGGTATAACCAATCTGAGCATGGACATAAGCACGCAGATCCTGATCATGATCCTGAGAAGTATGACCACTATGAGCATCATCGTGGACGAGGGCAGTATGATCATGTAGATGATCATGGTGACCATTACAATCAATATCCTGATCATGATACCATCGAAGATGACTACCACATGGGACGTGCAACATCTGAATCACGTGAAAAGGAGCGAAATCGTGATATGGACCATGAATATCGTCGCTCAGAGAGATCTCATTCACGGGAGTATGATTACTAG 1140 0.4746 MFCGCCSYICFFADDPHNDPNISGDPYKTLFVAKLSYETSESRLKREFESYGPIKRVRLVADKASNKPRGYGFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNEHHSGREQQQSRSEEPRAREDRHADRDREISRERGRDRDRERSREHSHERVRDRDYREDRHHRDRDRTRDKDRERDRDRDRDRGRDRDRARDRDRDRERERDRDRHRERDRDYEVGDTDRGRSRDRESDYDRVESKHERDRHGERERDYEPEDDRGWYNQSEHGHKHADPDHDPEKYDHYEHHRGRGQYDHVDDHGDHYNQYPDHDTIEDDYHMGRATSESREKERNRDMDHEYRRSERSHSREYDY* 380
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0581 379 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 99 IPR000504 GO:0003723
Dod02g0581 379 Gene3D - 15 140 IPR012677 -
Dod02g0581 379 MobiDBLite consensus disorder prediction 128 379 - -
Dod02g0581 379 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 15 246 - -
Dod02g0581 379 SUPERFAMILY RNA-binding domain, RBD 16 128 IPR035979 GO:0003676
Dod02g0581 379 PANTHER - 15 246 - -
Dod02g0581 379 CDD RRM_snRNP70 27 117 IPR034143 GO:0030619
Dod02g0581 379 SMART rrm1_1 29 102 IPR000504 GO:0003723
Dod02g0581 379 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 106 IPR000504 GO:0003723
Dod02g0581 379 MobiDBLite consensus disorder prediction 110 379 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod02g0581 Dod-Chr2 7573728 7578034 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0581 30 76 C2H2 Transcription Factor Family AT2G19380 38.298 5.89e-06 46.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0581 K11093 - gmx:100814484 249.21