Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0566 ATGATGCATCGTTCTTGCAGTGGAACACAAGGGCACGTGATGGGACCCTGCACATGTGGTATGTTCCACTCCCAAACCAATTCCTTCTCCATGGTATTCTCCATGCCAAACCACAAGCCCGATGAATATGATGAACCCGACATGTATTCCTACACCCAATCTTCGTCCTCCGTGGACTGCACTCTCTCCCTGGGAACCCCTTCCACCCGTTTCACCGAAGACGAAGAGAAGCGTAGCCGCCATGAACGCCGCTCCTCCGTCTCCAACTTCTGCTGGGACTTGCTGCAATCCAAACACAGCCCTCATAATCATTATCAGTCCCAAACAAAGTCCACCAACCGTGCGAGTAACAATGGTAACAGCAGCTCCAACAACAACGACCCTCTCCTCGCTCGTCGCTGCGCCAACTGCGACACCACCTCAACACCCCTCTGGAGGAATGGCCCTCGTGGCCCAAAGTCGCTGTGCAATGCCTGTGGGATACGATTCAAGAAAGAAGAGAGGAGGGCGAGCGCCGCCGCAGCCGCTCCGGCGGCTGCTTCTGGAGGCGTCATGGAGTCGGCGCAGATGTACAACCACCACCACGGAAACTCGTGGTACGGTCACCCGCAGGGCCAGAAGATGCAGTGCCTTTCGCCGGCGTCTGGGATGGGCGGCGAGTTGCGGTTCGTGGACGACAGCGACCGTGATTCCGAGAACGGCATTCCCTTCCTGTCTTGGAGGCTCAACGTTACGGACAGAACAAGCCTCGTTCATGACTTTACAAGATGA 771 0.5642 MMHRSCSGTQGHVMGPCTCGMFHSQTNSFSMVFSMPNHKPDEYDEPDMYSYTQSSSSVDCTLSLGTPSTRFTEDEEKRSRHERRSSVSNFCWDLLQSKHSPHNHYQSQTKSTNRASNNGNSSSNNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAAAPAAASGGVMESAQMYNHHHGNSWYGHPQGQKMQCLSPASGMGGELRFVDDSDRDSENGIPFLSWRLNVTDRTSLVHDFTR* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0566 256 MobiDBLite consensus disorder prediction 48 69 - -
Dod02g0566 256 CDD ZnF_GATA 133 165 IPR000679 GO:0006355|GO:0043565
Dod02g0566 256 ProSitePatterns GATA-type zinc finger domain. 134 159 IPR000679 GO:0006355|GO:0043565
Dod02g0566 256 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 131 169 - -
Dod02g0566 256 ProSiteProfiles GATA-type zinc finger domain profile. 128 164 IPR000679 GO:0006355|GO:0043565
Dod02g0566 256 Pfam GATA zinc finger 134 168 IPR000679 GO:0006355|GO:0043565
Dod02g0566 256 MobiDBLite consensus disorder prediction 44 82 - -
Dod02g0566 256 Gene3D - 130 209 IPR013088 GO:0006355|GO:0008270
Dod02g0566 256 SMART GATA_3 128 183 IPR000679 GO:0006355|GO:0043565
Dod02g0566 256 PANTHER GATA TRANSCRIPTION FACTOR 18 1 255 IPR044272 GO:0003700|GO:0009908
Dod02g0566 256 MobiDBLite consensus disorder prediction 100 129 - -
Dod02g0566 256 PANTHER GATA TRANSCRIPTION FACTOR 18 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0566 Dod-Chr2 7376893 7378014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0566 18 256 C2C2-Gata Transcription Factor Family AT3G50870 46.048 8.33e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod02g0566 GATA 6.3e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0566 - - gmx:100790571 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0566 02 7376893 7378014 Dod02g0566 02 7376893 7378014 ECH