Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0550 ATGGCTGGTGGGGTGGTTTTTGCATCATTTTTTGCAAAGATGAATGATCTGATGACAAATTCGTTCCTAAGTTATGTTGAACTGAAGAAACAGGCTATGAAGGACCTTGAGAACGATCTTGATATTGAAGCAGGGCAACTCAACCCCACACAAGACCCTAACCTCACTCAGTTCTTACAAGAAGTGGATGCAATCAAGGTTGAAATGGAAGAGATCACCAATCTCTTATTTGATCTTCAGCAACTGCATGAAGATGCAAAGTCCGCTCACAGTGCAAAAGTCCTGCGTGGGCTAAGAGACAGGATGGAGTCTGACATGGTTGCCGTGCTTCGCAAGGCAAAGATCATCAAGGCAAGGCTTGAGGTTCTTGACCAATCCAACATAGCCAACAGAACTTTGTCTGAGTCCTACAGAGAGGGAACCCCAATTGATAGGACTAGGATGTCTGTCACAAATGGTTTGAGGTTCAAGCTTCGGGACTTGATGAGTGAGTTTCAGTCCTTGAGGAACAGGATTATGTCTGATCACAAGGAAGATTTGAAGAGAAGGTACTACACGGCAACCGGCGAGATTCCCAGCGAGGAGGTCATGGAGAAGATGATCTCAGGGAGTCTCAAAGTTGAGTTTTTGGCTGGGAAAACAGATGCTGACATGGGCACTCAGGTTAGGCATGAGGCTGTGATGGATATCCAGAGGAGTTTGAACAAGCTTCACCAGGTTTTTCTTGATATGGCTATCCTTGTTGAGACACAAGGGGAGAAAGTGGACAACATTGAAGATAATGTGGCCAATGCTGGAAACTACATCCATGGTGGGACTAATAGTCTACACTATGCCAATCAGATGAAGAAGAGGAACAAGAAATGGATCTGTTGGGTCTGTGCTGTGGGGCTGATTGTGCTGTTGGTGTGCTTCATTGCAATGCTGACTTCTTAA 936 0.453 MAGGVVFASFFAKMNDLMTNSFLSYVELKKQAMKDLENDLDIEAGQLNPTQDPNLTQFLQEVDAIKVEMEEITNLLFDLQQLHEDAKSAHSAKVLRGLRDRMESDMVAVLRKAKIIKARLEVLDQSNIANRTLSESYREGTPIDRTRMSVTNGLRFKLRDLMSEFQSLRNRIMSDHKEDLKRRYYTATGEIPSEEVMEKMISGSLKVEFLAGKTDADMGTQVRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKVDNIEDNVANAGNYIHGGTNSLHYANQMKKRNKKWICWVCAVGLIVLLVCFIAMLTS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0550 311 SUPERFAMILY t-snare proteins 52 272 IPR010989 GO:0016020|GO:0016192
Dod02g0550 311 CDD SNARE_syntaxin1-like 221 276 - -
Dod02g0550 311 CDD SynN 58 205 IPR006011 GO:0016020
Dod02g0550 311 PANTHER SYNTAXIN-112 17 307 - -
Dod02g0550 311 Pfam Syntaxin 57 252 IPR006011 GO:0016020
Dod02g0550 311 SMART tSNARE_6 212 279 IPR000727 -
Dod02g0550 311 SMART SynN_4 50 177 IPR006011 GO:0016020
Dod02g0550 311 Gene3D - 50 181 - -
Dod02g0550 311 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 217 279 IPR000727 -
Dod02g0550 311 Pfam SNARE domain 253 303 IPR000727 -
Dod02g0550 311 Gene3D - 213 310 - -
Dod02g0550 311 PANTHER SYNTAXIN 17 307 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0550 Dod-Chr2 7218372 7219745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0550 14 311 SNARE and Associated Proteins AT2G18260 58.958 3.53e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0550 K08486 - gmx:112997615 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0550 02 7218372 7219745 Dod02g0550 02 7218372 7219745 ECH