Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0542 ATGGAGAAAGTACCACATGGTAACCGGTTTACATACACTCTCAATTCATTCTCAACCAAGAAGGGGCGCAGTGGTTATGAACCATCAGACACAGAGACAGAGTGGCAGGATGTTCCAAGGCATGAAAGAAAGAAGGCACCACCCGCCGCAATAACAGCTTCGGCTTCAAGCCAACCACGAAGAAGACAGCATAAAAATACAAGTCCCTTGCCTAAACGAGACCCTGCAAGAACCGTGTCTTCTTACAACAGAAAGCATGAGCAAAGAACAGTCACACCCTCCACAGTGACTGAGAAGCCAAACCACAGGAGAGCAGTGACTGCACCAAGGTTGAGGGAACAACAGAGAAGTAGTCACGTGCAGAACGTGGGGAGAACTTCCTCACCATTGACCAGAGCCATGATTCAAAAACAAAGGGAAGTTTCACCTTTCAAAGCTTCTTCATCAGTGGGAGAGATCAATGAAATGATAGCAGAGGTGAAACTATCCAAGAACCCCACCAATGATGATCACTCGGAGCTTGAAAGCACAGAGTCTATTGAACCAGGTGACCTTTTCTTCTCTCGCGAGTGCAATGTCTTGCAAGGCAAGAATTCTTCGTTACCGAAAAGCATTCAACAGTGTGAATATTTCAGCCCAAGGCCTGGAATAACCACCATGAATCCCACTAGAGGGCCCCCTTCTTCCATTCAGGATCATAACAGCAAAGGAAATGGCAACCTCAATGTGAACATGGCACGAGGCACTTCATCAGGCAATGCCTTTTCTGGATTGAGTTCTGCTGCTACAAGCAGAAAGGGAAGCAGTAGTGTGACAAGTGATACCAGTGGGAAGACTAGTGAGAGCATGAGGAAATTCACGGCCAACAGAAAGAAGAGCCAGAAGGATACCTGGTTTTCTTGCATGAGAACAGGAAACTGTAGGAAGGCGAGGAAATCACCAGAGCGCCAGCCGATCCATGAGGCTTCTTTCGTTGAGAGGGCTGTGGTGGTGGAAAGCCTGCCACAATTCTGGGCAGATAAGCATCAACCTGCTTCACTCAATGGTTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATCAGTGTCTCAAGGCTCTTGTCCTCATATTTTGCTCAAAGGAACCTCTGGTTGCTGGAAAAGAGAACTAGCAATGGCTCTTCTACGAGAAATATATGGTGATGCATGTTGCAATGACAAAAGACCTGCGAAATTATGTGTTCCAATAACGTACAGTTCTCATCACATGGAGCTCAATGTGATGGACCCAAATGCTAAAGTAATGTTTCTTTATGAGGTAGACAAAGCAGTAGAGAACATCCAGCACATGATCAAGTGGATTATAGACCGCTATTCAGACATATGCAAACTAGTACTCTTCTGTGAAGATGATGGAGGACTTCTTGAACCTGTGAAAAACCGTTTCAAAGTTATCAAAGTTGATGCTCCTCAAACTCACGAAATTACTGAGGTTCTTATTCAGATAGCAAAGAAAGAGGAAATTGATCTGTCCCTGAATTTTGCTGCAAAGATTGCCACAAAGTCAAAGCAGAACCTTAGGAAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAATTATCCATTTTCTGAAGAACAACCAATTCCTGTTGGATGGGAGGAGATTGTAATAGAAGTAGCTGCAGAGATTCTCGCCGATCCATCATTTTCACGCTTACTCTCAATACGAGGCAAATTTCAGATGCTTCTCCTGGATTTTGTCCACCCCAAATTGATTCTTCAGAAACTGGTGGAACAGCTCCTTAAAAGAGTTGAGGCCAGCTCAAAAAGGGAGGTCTACTACTGGCATGCTTACTATGACAGAAGACTACCACCAGGAACAACGGCTTTGTTAAAATTAGAAGAATTTGTGGCCAAGTTCATGAGCATATACAGAAAAAGCTCTAGCAGCAGTCGGCAACTTGTATAG 1956 0.4443 MEKVPHGNRFTYTLNSFSTKKGRSGYEPSDTETEWQDVPRHERKKAPPAAITASASSQPRRRQHKNTSPLPKRDPARTVSSYNRKHEQRTVTPSTVTEKPNHRRAVTAPRLREQQRSSHVQNVGRTSSPLTRAMIQKQREVSPFKASSSVGEINEMIAEVKLSKNPTNDDHSELESTESIEPGDLFFSRECNVLQGKNSSLPKSIQQCEYFSPRPGITTMNPTRGPPSSIQDHNSKGNGNLNVNMARGTSSGNAFSGLSSAATSRKGSSSVTSDTSGKTSESMRKFTANRKKSQKDTWFSCMRTGNCRKARKSPERQPIHEASFVERAVVVESLPQFWADKHQPASLNGFICNKQEAQLLKESVSQGSCPHILLKGTSGCWKRELAMALLREIYGDACCNDKRPAKLCVPITYSSHHMELNVMDPNAKVMFLYEVDKAVENIQHMIKWIIDRYSDICKLVLFCEDDGGLLEPVKNRFKVIKVDAPQTHEITEVLIQIAKKEEIDLSLNFAAKIATKSKQNLRKAIMALEACKAHNYPFSEEQPIPVGWEEIVIEVAAEILADPSFSRLLSIRGKFQMLLLDFVHPKLILQKLVEQLLKRVEASSKREVYYWHAYYDRRLPPGTTALLKLEEFVAKFMSIYRKSSSSSRQLV* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0542 651 Gene3D - 547 640 - -
Dod02g0542 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 533 IPR027417 -
Dod02g0542 651 MobiDBLite consensus disorder prediction 1 126 - -
Dod02g0542 651 Gene3D - 487 544 - -
Dod02g0542 651 MobiDBLite consensus disorder prediction 222 283 - -
Dod02g0542 651 MobiDBLite consensus disorder prediction 9 24 - -
Dod02g0542 651 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 139 646 - -
Dod02g0542 651 MobiDBLite consensus disorder prediction 25 47 - -
Dod02g0542 651 SUPERFAMILY post-AAA+ oligomerization domain-like 547 640 IPR008921 GO:0003677|GO:0006260
Dod02g0542 651 Gene3D - 326 486 IPR027417 -
Dod02g0542 651 MobiDBLite consensus disorder prediction 85 101 - -
Dod02g0542 651 MobiDBLite consensus disorder prediction 222 291 - -
Dod02g0542 651 MobiDBLite consensus disorder prediction 111 126 - -
Dod02g0542 651 PANTHER OS02G0704966 PROTEIN 139 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0542 Dod-Chr2 7106430 7110801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0542 337 641 Core DNA Replication Machinery Family AT5G27740 36.812 2.03e-68 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0542 K10756 - gmx:100795321 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0542 02 7106430 7110801 Dod02g0542 02 7106430 7110801 ECH