Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0531 ATGTTTTCCGCAAGAGAGATGCCTTCCCCATCAACAATCTTCTCTGCGTATGCCTCCATGACAGCCTCCATCATGCTCGTTCGCTCACTGGCCAACGAGCTCATTCCTCAACCAATCCGAGGCTACCTCTTCAACACCTTCCGCTACTTCATCAAGCCTCGCTCCAACGCCCTCACCCTCATTATCGAAGAGTACTCCAGCGGCATAGCCCGCAACCAGGTCTACGATGCAGCCGAGGCATACCTCTCCACCAGAGTCAGCCCCGAAAACGAGAAGCTCAAGGTCTGCAAGAGTCCCAAGGAGAAGAAAATCACCATTCGCTTGGAAAAAGGTGAGAAGCTCGTCGACTTCTACGACGGCGTTTTGCTCAAGTGGAGGTTCATCTGCGCAGAGTCAGAGAAGAACAGCCCCAACGACCACAACAACATCTCCGTAAGGTCGGAAAAAAGGTACTTCGAGCTGAGCTTCCACAAGAAGCAGAAGGATATGGTGTTGGGGTCTTATCTCCCTTTCATTCTCGAGAAGGCCAAGGAGATGAAAGACGAGGAAAGGGTTCTGAAGATGCACACCCTAAACACTTCTTATTGCTATGGTGGGGTGAGGTGGGAGTCCATTAACTTGGAGCACCCTTCAACTTTTGAGACGCTGGCTATGGAGTCGGAGCAGAAGGAAGCGATCATGGAGGACTTGAATAGGTTCGTGAAGAGGAAGGAGTTTTACAAGAAAGTTGGCAGGGCTTGGAAGCGTGGGTACTTGCTGTATGGCCCTCCGGGTACTGGGAAATCGAGCTTGATTGCGGCCATGGCTAATTACCTCAAGTTTGATATCTATGACCTGCAACTTGCCAACATAGTGAGGGATTCGGACCTCAGAAAGCTGCTGCTGGCTACTGCAAATAGGTCCATTCTTGTCATCGAAGATATTGATTGCAGCGTCGACCTGCCTGAGCGTCGCCATGGAGATTCACGTAAACAATCTGATGTCCAGTTAACTTTGTCTGGATTACTGAACTTCATAGATGGGCTATGGTCCAGTTGTGGGGACGAGAGAATCATCATATTCACCACCAACCACAAGGAAAGGCTAGACCCAGCTCTGCTTAGGCCCGGAAGAATGGACATGCACATTCACATGTCTTATTGCTCCTACCAAGCCTTCAAGACTTTGGCCTCAAATTACTTGGAAATTTCCCATGATCACCACCTCTTTGGGGAGATAGAAGGGCTAATAGAGGAAACGCAGATAAGCCCTGCGCAAGTGGCAGAGGAACTGATGAAGGACGAAGACGCTGAGGCGGCACTGGAAGGGTTCGTGAAGCTCCTTAAGAGGAAGAAGTTGGAAGGTGACGTGTGTGAGAATGATGGTCCAGATAATAAAGTGGAAACTCGGCAATCAAAAAAGCGTAAGGTTGGGTGCAAGCAAAAAAGAGCTGTTGCTGGTGGTAGTGGCACCCAAAGAAGGACAAGAAGGCTTAGAAGAAGGCGTAGTTTGTAA 1494 0.4953 MFSAREMPSPSTIFSAYASMTASIMLVRSLANELIPQPIRGYLFNTFRYFIKPRSNALTLIIEEYSSGIARNQVYDAAEAYLSTRVSPENEKLKVCKSPKEKKITIRLEKGEKLVDFYDGVLLKWRFICAESEKNSPNDHNNISVRSEKRYFELSFHKKQKDMVLGSYLPFILEKAKEMKDEERVLKMHTLNTSYCYGGVRWESINLEHPSTFETLAMESEQKEAIMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLANIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERRHGDSRKQSDVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYQAFKTLASNYLEISHDHHLFGEIEGLIEETQISPAQVAEELMKDEDAEAALEGFVKLLKRKKLEGDVCENDGPDNKVETRQSKKRKVGCKQKRAVAGGSGTQRRTRRLRRRRSL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0531 497 Pfam Domain associated at C-terminal with AAA 35 128 IPR025753 -
Dod02g0531 497 CDD AAA 248 380 - -
Dod02g0531 497 PANTHER BCS1 AAA-TYPE ATPASE 6 464 - -
Dod02g0531 497 MobiDBLite consensus disorder prediction 451 497 - -
Dod02g0531 497 Gene3D - 200 376 IPR027417 -
Dod02g0531 497 MobiDBLite consensus disorder prediction 451 467 - -
Dod02g0531 497 ProSitePatterns AAA-protein family signature. 350 368 IPR003960 GO:0005524|GO:0016887
Dod02g0531 497 Pfam ATPase family associated with various cellular activities (AAA) 252 379 IPR003959 GO:0005524|GO:0016887
Dod02g0531 497 Gene3D - 377 449 - -
Dod02g0531 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 426 IPR027417 -
Dod02g0531 497 SMART AAA_5 247 382 IPR003593 -
Dod02g0531 497 PANTHER BNAA10G17020D PROTEIN 6 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0531 Dod-Chr2 6921893 6926941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0531 225 382 Calmodulin-binding Proteins AT3G56690 28.313 2.95e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0531 - - gmx:100789621 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0531 02 6921893 6926941 Dod02g0531 02 6921893 6926941 ECH