Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0530 ATGATGAGTTCATACATGGCGACTCTATCTTCTTCCTTCACTAGCTTCAAGTCAGCGTCATCATGGTTCGAGGTCTACGCCGCCTTCTCCACATTCGTGATGCTCCTCAGAACAGCAATCAACGACCTCATCCCCGAGAAGCTCCGATCCTTCATCGCCTCAAAGCTCGTGTCTCTCTTCTCCAATACCCGCCCAAACAACCTCGTGTCTCTCCGAATCAACAGAAGATGGGAGGACCAAGGCGGGGACCACAACGAACTCTTCTGTGCTGTCTCCAACTACCTTCCCTCCAGAATAACCCGAACCTACAAAGCCCTCAAAATAGGCAAATTGAACTCCCACAAGAACCTCGTGTTTGCCTTGGACGCAACCCAAGAGGTAGTTGATCAATTCGAAGGCACCGATTTCACTTGGACATTCGACAACGGTTCAGACAAGGATTCGGACAAGGACAGCGTTGCTTACGTGCTCAGCTTCCACGAGAAGCACCGGGAGACAGCGATGAAGAGGTACATACCGCACGTGATTAAAACGTACGAAGCGATGAAGGCGGAGCAGAGAACCGTTAAGATATTTTCCATGTCACAGACGTATTGGAGCCAGAATGAACTGTCGCACCCTGCCAAGTTGGACACGCTCGCATTGGATCCTGAATTGAAGCAACTCATTGTTAATGACTTGGATCGGTTCTTGAAGAGGAAGGAGTTCTACAAGAGAGTGGGTAAGCCTTGGAAACGTGGATACCTATTGTATGGCCCTCCAGGAACGGGGAAATCTAGCCTCATTGCGGCTATTGCCAATTACTTGAAGTTCAATGTGTACGATTTGGAACTCAACTCGGTTTATAGTAACGAAAACCTCATGCAACTAATGAGGCGTACATCCACCCGTTCCATCATTGTGATTGAAGACATTGATTGCAACAAAGAGGTACACGTTCGAACCGATCGCAGAGATTATACAGACACGGACTCAGACCATAATGAGGTTGACAAGTTTACTCTGTCGGCTCTATTGAACTACATGGATGGGTTGTGGTCAGGGTTTGGAGAGGAACGGATTATAATATTTACGACAAACCACAGAGAGAAAATTGACCCAGCTTTGCTGCGACCGGGTCGGATGGCACATGCACATACACTTGCCGTTCCTTAA 1155 0.4805 MMSSYMATLSSSFTSFKSASSWFEVYAAFSTFVMLLRTAINDLIPEKLRSFIASKLVSLFSNTRPNNLVSLRINRRWEDQGGDHNELFCAVSNYLPSRITRTYKALKIGKLNSHKNLVFALDATQEVVDQFEGTDFTWTFDNGSDKDSDKDSVAYVLSFHEKHRETAMKRYIPHVIKTYEAMKAEQRTVKIFSMSQTYWSQNELSHPAKLDTLALDPELKQLIVNDLDRFLKRKEFYKRVGKPWKRGYLLYGPPGTGKSSLIAAIANYLKFNVYDLELNSVYSNENLMQLMRRTSTRSIIVIEDIDCNKEVHVRTDRRDYTDTDSDHNEVDKFTLSALLNYMDGLWSGFGEERIIIFTTNHREKIDPALLRPGRMAHAHTLAVP* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0530 384 PANTHER BCS1 AAA-TYPE ATPASE 15 376 - -
Dod02g0530 384 Pfam ATPase family associated with various cellular activities (AAA) 249 377 IPR003959 GO:0005524|GO:0016887
Dod02g0530 384 CDD AAA 245 375 - -
Dod02g0530 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 384 IPR027417 -
Dod02g0530 384 Pfam Domain associated at C-terminal with AAA 44 140 IPR025753 -
Dod02g0530 384 Gene3D - 200 384 IPR027417 -
Dod02g0530 384 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 376 - -
Dod02g0530 384 SMART AAA_5 244 384 IPR003593 -
Dod02g0530 384 ProSitePatterns AAA-protein family signature. 353 371 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0530 Dod-Chr2 6914983 6917004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0530 246 384 Calmodulin-binding Proteins AT3G56690 31.293 2.14e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0530 - K08900 gmx:100789094 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0530 02 6914983 6917004 Dod02g0530 02 6914983 6917004 ECH