Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0517 ATGGCGGGTTTGTTCTCACTAGGCGGTAGCAGTAGTAGTAGAGGGAGAGGCAACAGCCAACACCAACACGAAGAACAACAACAACCACCACAGCAAACGGAAATTTCTCCCCCCGACACCTTTTACTGGTACAACAAGAATGACGATGTTTCCTCCTACCGAGGTTTCGAGCTATGGCACCAACACCACCAACAGCAGCATCAAGAGCTCAGTATCCCTCAAGCGAGGCCTCTCTTCCACCAAGATCTTTACTCATCGGCGGCTGCGCTAGGCGTCGGGCCAAGCACCGTCTCCGACGATCAGTCCCCGTCGAGATCGGCGTTCGTGGTGACGGCATCCGCCGTGGGAAGCGGAGGGAGCGGCGGGGGAGGGATCAGCTGCCAGGACTGCGGGAACCAGGCGAAGAAAGATTGCCCTCACATGCGGTGCAGGACATGCTGCAAGAGCCGAGGCTTCGATTGCCAAACCCATGTCAGGAGCACTTGGGTTCCAGCTTCAAAGCGCCGCGAGAGACAGCAAAACCTCGCAACTTTGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCTTCATGGAGGAGATGTTCCTAAGAGGCAGAGAGATCATCATGGCACTCGTTTGCCCACAAACCCTTCTCCCTCAGGCTCCGCCTCAGGGTTAGAGAATTTCCCTGCTGTGGTGAGCTCTCCTGCGGAGTTCAGGTGCGTACGTGTGAGCTCCATGGACGACGCAGATGACGAGTTCGCTTATCAAACGGCTGTGAACATTGGAGGGCACGTCTTCAAAGGGATCCTCTATGACCAGGGTCTAGACAGCAGCACAAACAGTAGCTACATGGCCGGAGAGAGTTCCTCCACCGCCGGCGGAGGAGGAGGTGGTCAGCCTAATTTGAACCTCATTGCTGCTGCCGCCACTACCACCACCACCACTGCAGCCCTTGTGCCTGGTGGGGGACTCGTTGATCCTTCATCCTTATATGCACCAACTCCGCTTAACCCCTTCATGGCTGGTAGTAGTGGTACGCAATTCTTCCCTCACCACCCAAGATCTTGA 1053 0.5603 MAGLFSLGGSSSSRGRGNSQHQHEEQQQPPQQTEISPPDTFYWYNKNDDVSSYRGFELWHQHHQQQHQELSIPQARPLFHQDLYSSAAALGVGPSTVSDDQSPSRSAFVVTASAVGSGGSGGGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVRSTWVPASKRRERQQNLATLQQQQQQQQQQQLHGGDVPKRQRDHHGTRLPTNPSPSGSASGLENFPAVVSSPAEFRCVRVSSMDDADDEFAYQTAVNIGGHVFKGILYDQGLDSSTNSSYMAGESSSTAGGGGGGQPNLNLIAAAATTTTTTAALVPGGGLVDPSSLYAPTPLNPFMAGSSGTQFFPHHPRS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0517 350 MobiDBLite consensus disorder prediction 1 40 - -
Dod02g0517 350 MobiDBLite consensus disorder prediction 165 222 - -
Dod02g0517 350 Pfam Domain of unknown function (DUF702) 124 271 - -
Dod02g0517 350 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 346 IPR007818 GO:0003700|GO:0006355
Dod02g0517 350 MobiDBLite consensus disorder prediction 1 41 - -
Dod02g0517 350 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 126 168 IPR006510 -
Dod02g0517 350 Coils Coil 168 188 - -
Dod02g0517 350 MobiDBLite consensus disorder prediction 165 193 - -
Dod02g0517 350 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 1 346 - -
Dod02g0517 350 MobiDBLite consensus disorder prediction 206 222 - -
Dod02g0517 350 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 223 270 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0517 Dod-Chr2 6767247 6770218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0517 1 350 C2H2 Transcription Factor Family AT3G51060 46.782 7.27e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Dod02g0517 DUF702 6e-68 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0517 - - ahf:112720334 338.961