Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0504 ATGGAGGGAGTAGTTACCTGGATAGATTTAATCGTCCTTCCTCCTTTCTTCACTTTCTCCACAACCCCACCTCCTGCAACTTCAACCAAACAAGCACCGTGTCCGGCGTGCCCTCTTTGTTTAGCCCCAACACCCACCGTAGAGTTCACGCGTGCTCCACCTATCGCCCAAGCTTTGGTACCTACTCGTGACAGTAATCGAAGATCAATACCTCAGCATATCGCTCCCAATCTTCCTTCATTAACGGCGCAAGAAGTTGGGGTGAAGGTGCAGAGAGGAGAAGGAGTGGGAAGAGAGAGAAAGGAAGAAACGGGCACTTTTAGTAATAATCCAGCCAGGGACACTTTCACCCCTCATTCAATGCTTTACCAAACTCCCCATCCTCTCCTCTTACAATTTCATCATCCCTTGCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCACCCTCCTTCGCCTTTCAACCACGCCATCGCTTCCTCTCTCTTATTATCATACTCTCCCTCAGGGTGAAACGGAAATGGAGTGCGTTGAGGCAGCGTTGAAGACCAGTTTTAGGAAAGACATGGTCATGAAATTTAGCCCACAGACTTTCATTGAGGAGCATTCGGCTTTTAATGTTCAAAATGGCGCACCCTGCGACGACTTTTTGGTGGACGAGCTCCTTGACTTCTCGCACGTGGAACAAGAAGAAGAAGAAGAAGAGGAGGAACAACAACAACAACAACAGCAACAAGAAGGACCGCAACAACTACAACACAAGGAAGGAGACTCTCTCTGTGTCTCCCCTCAACAAAGCCCCGAAATTTGCAACCCCGCCACCACAACTCACCACTATGCCTCTCTCCCCACTAGCGAGCTCAGCGTTCCGTTGCGATTTTTACAGGATGATGTGGCGGACTTGGAGTGGCTGTCCCATTTCGTGGAGGATTCCTTCTCGGAATTCTCTGCTCCCATTCCCACCGTGACAACCTCCGACGACAACAAACCGAAAGAGCCTACCACGGCCCAAAAGCCCGACCCCTTAAGCCTTGTTCCCACTCAGCCCTGTTTCAAAACCCCCGTGCCCGCCAAGGCCCGCAGCAAACGAACCCGAACCGGTGTTCGTGTCTGGCCACTTGGCTCACCCTCCTTCACGGACTCATCCTCAAGCTCCACCACCACCACCACAACAACAACAACAACCACCTCATCCTCTTCCTCTTCTTCCCCTTCGAGCCCCTTGCTAATTTACACCCAAAGCAGCATGGACCGTGTTTACTCCGAGGCTCCGGCGAAGAAACACAAGAAGAAGCCCTCTTCCAACGGCGGCGGCGCGGCCACACTTGCGGCGGCGCCACGGCGGTGTAGTCATTGCGGCGTCCAGAAGACCCCACAGTGGCGAACGGGTCCCCTTGGAGCGAAAACTCTTTGCAACGCGTGTGGGGTCCGGTACAAGTCGGGTCGGCTTTTACCCGAATACCGACCCGCTTGCAGCCCGACTTTCTCAAGCGAGTTGCACTCGAACCACCACCGGAAGGTTCTGGAGATGCGGCGGCAGAAGGAGATTACCATCGGTGGGGTTGACACCCCTTTGACCCCTCCTCCGGTTGTTCCCAGTTTTTGA 1602 0.5331 MEGVVTWIDLIVLPPFFTFSTTPPPATSTKQAPCPACPLCLAPTPTVEFTRAPPIAQALVPTRDSNRRSIPQHIAPNLPSLTAQEVGVKVQRGEGVGRERKEETGTFSNNPARDTFTPHSMLYQTPHPLLLQFHHPLPSSSSSSSSSTLLRLSTTPSLPLSYYHTLPQGETEMECVEAALKTSFRKDMVMKFSPQTFIEEHSAFNVQNGAPCDDFLVDELLDFSHVEQEEEEEEEEQQQQQQQQEGPQQLQHKEGDSLCVSPQQSPEICNPATTTHHYASLPTSELSVPLRFLQDDVADLEWLSHFVEDSFSEFSAPIPTVTTSDDNKPKEPTTAQKPDPLSLVPTQPCFKTPVPAKARSKRTRTGVRVWPLGSPSFTDSSSSSTTTTTTTTTTTSSSSSSSPSSPLLIYTQSSMDRVYSEAPAKKHKKKPSSNGGGAATLAAAPRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRQKEITIGGVDTPLTPPPVVPSF* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0504 533 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 444 505 - -
Dod02g0504 533 ProSitePatterns GATA-type zinc finger domain. 448 473 IPR000679 GO:0006355|GO:0043565
Dod02g0504 533 Coils Coil 223 246 - -
Dod02g0504 533 PANTHER GATA TRANSCRIPTION FACTOR 173 523 - -
Dod02g0504 533 MobiDBLite consensus disorder prediction 95 115 - -
Dod02g0504 533 Pfam GATA zinc finger 448 482 IPR000679 GO:0006355|GO:0043565
Dod02g0504 533 SMART GATA_3 442 496 IPR000679 GO:0006355|GO:0043565
Dod02g0504 533 ProSiteProfiles GATA-type zinc finger domain profile. 442 478 IPR000679 GO:0006355|GO:0043565
Dod02g0504 533 PANTHER GATA TRANSCRIPTION FACTOR 173 523 - -
Dod02g0504 533 MobiDBLite consensus disorder prediction 226 266 - -
Dod02g0504 533 Gene3D - 441 514 IPR013088 GO:0006355|GO:0008270
Dod02g0504 533 MobiDBLite consensus disorder prediction 316 441 - -
Dod02g0504 533 MobiDBLite consensus disorder prediction 374 418 - -
Dod02g0504 533 MobiDBLite consensus disorder prediction 240 266 - -
Dod02g0504 533 CDD ZnF_GATA 447 495 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0504 Dod-Chr2 6568505 6576140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0504 177 533 C2C2-Gata Transcription Factor Family AT5G66320 47.658 6.83e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod02g0504 GATA 8.6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0504 - - gmx:100783966 352.058